| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_5032 |
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| Symbol | |
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| ID | 3521520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5349804 |
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| End bp | 5352878 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637287471 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_271671 |
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| Protein GI | 71281051 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCC CTAGATTAGC GATAGATAAT GCACAATTCA CCTTAACAAT ATTTTTATTG
TTGGTTTTAG TGGGTGTAGT GTCCTATTTG AATATGCCTC GCTCAGAAGA CCCTCAGTTT
GATTTACCTG TCACCTTAAT TGAAGTGGTT TATCCTGGCG CTTCGCCCAG TGATATTGAA
ACTTTAGTGG TTGACCCACT TGAAAAAGAA ATTGCTGATA TTGAAAATAT TAAAAAGATA
GAAGCAAAAA TCCATAATGG TGCGGTAAGG ATTACCATAG ACTTTCTTTA TGGCACGGAC
GGTGAAACTG CGTTTAATAA AGTAAAACAG GCGGTATCTA CCGTAAGACC TAGCTTACCT
GCAGGTATCG CAGAGTTGTT GGTATTAAAA GCAACACCTA GCAGTGTTGC TATAATGCAG
TTGGCTTTGT GGTCTGAGCC TACCAACTAT AAAACGATGG AATTGCATGC CAAGTTATTG
GAAAAACGAC TAGAAACAAT AGCCAGTGTA CGTAAGGCAA GTATTTGGGG ATATCCGCGG
CAAATTGTTG CGATAGATAT TAATTTACCC TTATTAAAAT ATTATGACTT AGCGCTTACT
GATATTACCC AAGTGCTTCA AGGACGAGCA TTAAATATCA CGCCTGGATT TGTAGATGCC
AGCACACGAC GTTTTAATGT TAAAGCCAGT GGTAACTTCA CTCAATTAGT GGATATAGAA
AATACTGTTA TTAGCGATAA CAATATGGTC AGTGCGAATG GTGTATTAAA AGTAAAAGAT
ATTGCGGGCG TTACTTTTAC TGATGCTGAG CCAAGTTATT TAGCTTATTT TGATGATATA
CCAGCGATAT TTATTACGGT GGAGCAACGT GAAAAAACTA ATATATTTGT CTTAACTGAG
CAAATAAATC AAGAAGTTGA GCAGTTTAAA AATAGTTTAC CTCGTGGTAT TAAGCTGGAA
AAATTATTTC AACAAGCGGA CAGTGTTAAT GTGCGTGTTA ATGGATTTTT TGATAATTTA
ACGCAAGGCC TAGTTATAGT AGGTTTAATG GCTTTACTAT TTTTGGGCAT CAGAGAAGCC
TTAGTGGTGA TCCTCGCTAT TCCGATTTCA TTCTTGATGG CTATTGGTTG GCTTGATTTT
AGTGGCTATG GCTTACAGCA AATGTCGATT GTTGGTTTAA TTATTGCGCT GGGTTTGTTA
GTTGATAACG CTATTGTGGT AACTGAGAGT GTTCATAGAG AAAGTAAGCT TGGTAAAGAT
ATAAGGACTG CTGCAGCATC AGGCACCAGT AAAGTCGCTT GGGCTATTGC TAGTGGCACT
ATCACGACGA TGTTAGCCTT TTTACCAATG CTGATGATTC AAAGTAATAC CGGCGACTTT
ATTCGCTCAA TGCCCGTAAC TGTAGTGTTA GTATTATTTG CTTCGTTATT AGTGGCATTA
ACGTTAACAC CACTTTTAGC CAGTAAATTA CTTGTTGTTA TTGAAAAAGA CGATAAACCT
AAAAAGATTA AAATTAAGAC CCTGCAACAC TACGCCAATA AATTTGCTGA AAAGAGCTAT
ACCAATACGT TAACGATTTT AATGCGTAAT AAAGCTGCCG TTATTGTTGT GAGTTTACTG
ATGTTAGTAG CTATGTTTTC TTTATTTGGG CAAGTAGGTG TAAGCTTATT TCCAAAAGCA
GAAAAACCTA TGTTATTAAT TAATGTTACT ACTCCTGCTA ACTCATCTCT GGCATATACA
GATAAAGTGC TACAGCAAGT TCGACTGCAT GTTAAGCAGT ATGATTTAGT TGATAAAGTA
GCGCTAAATA TTGGTAATTC AAATCCACGT ATTTATTATA ATGAGGTCCC AAAACGCGGC
ATGATTCGTT TTGGCCAAGC GTTATTGGTA TTAAAGGATT ATCAGGCTGA TGAAGTCACC
ACGTTAGTAA AACGTTTACG TGATGATTTT AAAAATTGGC AGCAGGCGGA AATCACTGTT
AAAGAGTTTA CTCAAGGTCC GGTGACCGAT CAGGTTATTG CTATTCGGTT GTTAAGCGAA
TCCTTAACTG ACTTAGAGCA CGTTGCCAAT GATCTTTCGG CTAAAATGCG ACAGTTATCA
GGTATTGTAA ATATTGATAA CCCTATTGGC ATGGCAAACA CTGAGTTGGC GCTAACGATT
GACTACCAGC AGGCAGCATT AAGTGGTGTG AGTGTTGAAC GATTAGATAA AACCATTAGT
ACCATCTTAT CAGGTACGAC TGTTGGCCAG TTTAATGACG TTAACGGCGA AGATTACCCT
ATAATGATTC GTCAAAAAAA TCCTAGTATT GATAGTTTGT CAGCCATTGA AATTAGCAAT
AATCAAAGGG TTTCAATTCC CCTTGAGCAA CTCGCCACTA TGGAGTTAAA AAAGGGTGAC
AGTGACTTTT TTCATTATCA GAAGTTACGT ATGGCTAAAG TATCTGCCGA TGTTGAAACC
GGTTATTCAG TTGGCGAAAT CACTAAACAA TTGGTCAATT ATCTTGAACA GTATGATCTA
CCTGCAGGTA TGCATTTTAC TTTAGGTGGA GAAGAAGAAT CTAGACAGAA GACTTTTGCA
GGTTTAACAC AAGTTATGTT GATTACGGCG ATGGGAATAT TTGCAGTATT AGTGTTGCAG
TTTAAATCTA TTTTACAGCC AATGATTATT TTTAGTTCAA TCCCTTTTGC CATGGCAGGC
TCTATCATAG GCTTGTATTT AACAGGGTTA TCTTTTTCTA TGATGGCTTT TGTAGGTTTG
ATTAGTCTGT TTGGTATTGT TGTCAACAAT GCCATTATTT TGATTGATAG TACCAACGTT
AATTTGCGTT TAGGCTTAGA CAAGCATTCG GCAGTATTAA AGGCTAGTGC TGTTCGTTTT
ACGCCAATAT TGTTAACCAC ACTAACGACC ATAGGCGGTT TAATTCCATT AACATTATAT
GGTGGCAGTT TATGGCAACC ACTCGGTGTG GTACTTATTT CTGGTTTATG TGTGTCAGCT
ATTTCAAGCT TTTTATTGGT ACCTATTTTA ACTGAACTCT TTACAGAGCG AGCGTCCGAA
AATAGAGCTG ACTAG
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| Protein sequence | MKLPRLAIDN AQFTLTIFLL LVLVGVVSYL NMPRSEDPQF DLPVTLIEVV YPGASPSDIE
TLVVDPLEKE IADIENIKKI EAKIHNGAVR ITIDFLYGTD GETAFNKVKQ AVSTVRPSLP
AGIAELLVLK ATPSSVAIMQ LALWSEPTNY KTMELHAKLL EKRLETIASV RKASIWGYPR
QIVAIDINLP LLKYYDLALT DITQVLQGRA LNITPGFVDA STRRFNVKAS GNFTQLVDIE
NTVISDNNMV SANGVLKVKD IAGVTFTDAE PSYLAYFDDI PAIFITVEQR EKTNIFVLTE
QINQEVEQFK NSLPRGIKLE KLFQQADSVN VRVNGFFDNL TQGLVIVGLM ALLFLGIREA
LVVILAIPIS FLMAIGWLDF SGYGLQQMSI VGLIIALGLL VDNAIVVTES VHRESKLGKD
IRTAAASGTS KVAWAIASGT ITTMLAFLPM LMIQSNTGDF IRSMPVTVVL VLFASLLVAL
TLTPLLASKL LVVIEKDDKP KKIKIKTLQH YANKFAEKSY TNTLTILMRN KAAVIVVSLL
MLVAMFSLFG QVGVSLFPKA EKPMLLINVT TPANSSLAYT DKVLQQVRLH VKQYDLVDKV
ALNIGNSNPR IYYNEVPKRG MIRFGQALLV LKDYQADEVT TLVKRLRDDF KNWQQAEITV
KEFTQGPVTD QVIAIRLLSE SLTDLEHVAN DLSAKMRQLS GIVNIDNPIG MANTELALTI
DYQQAALSGV SVERLDKTIS TILSGTTVGQ FNDVNGEDYP IMIRQKNPSI DSLSAIEISN
NQRVSIPLEQ LATMELKKGD SDFFHYQKLR MAKVSADVET GYSVGEITKQ LVNYLEQYDL
PAGMHFTLGG EEESRQKTFA GLTQVMLITA MGIFAVLVLQ FKSILQPMII FSSIPFAMAG
SIIGLYLTGL SFSMMAFVGL ISLFGIVVNN AIILIDSTNV NLRLGLDKHS AVLKASAVRF
TPILLTTLTT IGGLIPLTLY GGSLWQPLGV VLISGLCVSA ISSFLLVPIL TELFTERASE
NRAD
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