| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_5029 |
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| Symbol | |
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| ID | 3519137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5345209 |
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| End bp | 5346249 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637287468 |
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| Product | putative general secretion pathway protein A |
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| Protein accession | YP_271668 |
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| Protein GI | 71278257 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | [TIGR03015] putative secretion ATPase, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.372214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGAAA GTTACTATGG TTTTAGTGAA CGACCTTTTC AGTTAAGCCC TGACCCGCGT
TTCTTCTTTG CAACCAACCA CCATCAACGT GCTTTATCTT ACTTACAATA TGGCTTAGAT
CAAGGTGAAG GCTTTATTGT TATTACCGGG CCTATTGGCA CAGGGAAAAC AACGATAGCC
CGCAATTTAT TAGCTAATAT AGCTGATGAA AATATTGTTG CCGCGCAATT AGTTACCACT
AAATTAACAC CCAATGAATT ACTTGATCTC GTTGCGGCTG AATTTAAAAT CACAGTAACA
GGTAACAGCA AGGCTGATGT CCTGCAAAGT ATAGAAAAAT TCTTAATTAA TTTGAACAAA
CAAGGTAAGC GCGCATTATT ATTGGTTGAT GAAGCTCAAA ACCTACCCGT TGAAACGGTA
GAAGAGCTGA GAATGCTTTC AAATTTTCAA CTCGATAATA AACCACTTAT CCAAAGTTTT
TTATTGGGTC AAGAAGAGTT AAAAGCAATT ATATCTGCAC CTGATATGGA ACAATTTAGA
CAACGTATTA TTGCTTCTGC ACACCTAAAA CCACTGAATG CCGAAGAAGT AAAAAACTAT
ATCAATCATA GATTAGCGCA AGCTAATTGC AATAGAGAAG CCTTGTTTTC AGATGAAGCA
TTTCAGCTTA TTTTTGAAAA AACGCTAGGC GTACCAAGAA AAATAAATAT TTTTGTTGAT
CGTTTATTAT TGTTTGGTTT TTTAGAGGAG TTAAATAATA TTGATTGCAA TGCCATCAAT
GAAGTTGCCA AGGAAATGTC TGTTGAGCTT ACCGGCTCTC TGAGTGGAAA TGTCCTTGAG
AGTGATAACA AACATCAACC ATTAGTAATC AATTCGACGG AAAATGTTGA AAATATTAAA
AATGTCTTAC GTGAAGTAGA AGAAATATTA GAAAGCTCAA TTCAACAGAA AGTTAAAATG
ACACGTTATA TTGATAAGCT TTTAAAACAA AAAAATCGTG AATTTGCTGA ATTACAGAGT
AAAACTGCTG ATAGTAAATA A
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| Protein sequence | MYESYYGFSE RPFQLSPDPR FFFATNHHQR ALSYLQYGLD QGEGFIVITG PIGTGKTTIA
RNLLANIADE NIVAAQLVTT KLTPNELLDL VAAEFKITVT GNSKADVLQS IEKFLINLNK
QGKRALLLVD EAQNLPVETV EELRMLSNFQ LDNKPLIQSF LLGQEELKAI ISAPDMEQFR
QRIIASAHLK PLNAEEVKNY INHRLAQANC NREALFSDEA FQLIFEKTLG VPRKINIFVD
RLLLFGFLEE LNNIDCNAIN EVAKEMSVEL TGSLSGNVLE SDNKHQPLVI NSTENVENIK
NVLREVEEIL ESSIQQKVKM TRYIDKLLKQ KNREFAELQS KTADSK
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