| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_5022 |
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| Symbol | |
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| ID | 3521420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5337636 |
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| End bp | 5338619 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637287461 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_271661 |
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| Protein GI | 71280951 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0134312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAA AGCATCAGTT CATTAAACGG CTTAATTTAT CAACGGTTTT ATGGCCTTTT
TTAAAAAACG GTTTATATTG CTTTAACTTT CACCGTATTG GCTCATGGCA AGAAACAAGC
TATGATCCTT GTGTATTTTC TTGTGACGCT GAAAACTTTG AAATCTATCT TTTTTTTATA
AAAAATAATT TCCGAGTTGT TACTCTTAAT GAGATTAATA ATATTGCTGA AAAAAACATT
CCAATTAAAG AGAAATTAGC ACTGATTACC TTTGATGATG GCTATAGTGA TAATTACCAT
ATTGCTTTCC CACTATTAAA ATCGTTAGGA TTACCCGCTA CTTTTTTTAT CACCACCAGC
TTAATAGACT CTAACCTTAT TCCATGGTGG GATGAAATTG CCTGGCATGT AAGGCAGTTA
GCAAATAAAA CCATTAAACT TGCCCCATGG CATCATGCTT TAACTATTGA TAAGACACCA
TCTCGACAAA ACATACGCAA TGTTTTACAA CAAATAAAAA TAAACCCTTC TTTAATTGAA
AGTCAACTAG ATGAATTACG GGCATTAACA CCTGCAAAAA TCTCTGATAA TGAAATTAAA
AGTCTATTTA TGACATGGCA TCAAGTTACT GAAATGGTTG AAAACAATAT GACGGTTGGT
GCACATTCAC ATACCCATAA AGTTTTCTCT TGTTTATCTG AAGCTGAGCT AAACTTTGAA
CTCAAAGAAT CTAAACGCTT AATAGATTTA AACATGTTGG GTAATATCAG TAGCTTATCT
TACCCTGTCG GTAGTGCTAC AACGTATGAC AAGAGTATGT ATGGAGCTAT TTCATCTAAC
GGTTATAAGT TAGCATTTTC ATTTAGTGCC ATAATAAATA AGAACCTTAA TGAAAATCGT
TTTGAAATAG GACGATTCTC AATAGATCAG CCTTTTAATG AAAGAGTATT TAAAGAAATG
ATTTTAAGTG CAAAATCAAA ATAA
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| Protein sequence | MNIKHQFIKR LNLSTVLWPF LKNGLYCFNF HRIGSWQETS YDPCVFSCDA ENFEIYLFFI
KNNFRVVTLN EINNIAEKNI PIKEKLALIT FDDGYSDNYH IAFPLLKSLG LPATFFITTS
LIDSNLIPWW DEIAWHVRQL ANKTIKLAPW HHALTIDKTP SRQNIRNVLQ QIKINPSLIE
SQLDELRALT PAKISDNEIK SLFMTWHQVT EMVENNMTVG AHSHTHKVFS CLSEAELNFE
LKESKRLIDL NMLGNISSLS YPVGSATTYD KSMYGAISSN GYKLAFSFSA IINKNLNENR
FEIGRFSIDQ PFNERVFKEM ILSAKSK
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