Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_5003 |
Symbol | |
ID | 3518340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 5318634 |
End bp | 5319761 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637287442 |
Product | hypothetical protein |
Protein accession | YP_271642 |
Protein GI | 71277755 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.403885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAACG CCAGGATAAA CCAATCAATC AAGTGCAATC AGGTGAGAAT ACATAACGTG GCGGATAAAA TCACTTGGGC TGAGCTAACT AAAATAGAAC AACTCTTAAA AATAATTCCT CAATGGGAAA AATTAATTAA AATTCAAACG ACAAGCAAAA TATTTAATTC TACTTCTTGG GTTGCCTCTT GGCTTGAAAC GTTCTGGCAA AAAAACTGGC AACTAAATGT TTTAATTGCT TGGTGTGATG ATGAGTTGAT TGCAATTGTA CCTCTTTATT ACCAACAAAA TAATTCAATA CTTCCAATGA AAGTACTTTA TCCTTTAGGT CAAGGCGAAG CTGAAGCACA AGAAATATCA ACCGAATATA CTGACATTCT AATTAACGAA AAATTTCAAG AACACTTATT ACCCAAAATT CAACAATGGA TATTGAATTT AAAAGCTGAC CAACTACATT GGCATGCATT ACTCCATAAT AGCTCTACTA GAAACATTCT CGCTGATTAT GAACAAACAA AGTCTAATGA GGCCACCCGC TACATTGTTA ATGGCTTAAA CTGGTCACTT GAAAATCTAT CTAAAAATAT GCGTTCTCGT TATAGAAGAG GCTTAAACCA ATTAGACAAA TTAAATGCAA CGATTGACTG GGTTGAACAA AGCGACTTTG ACCAGTATTG GCAACTGATG AAAAAATTAC ACCAAAAAAG GTGGCAAGGT AAGAATGCAA AGGGCGCTTT CTGTAGCGAT GAATTCAATC AATTTCATGC AAAGTTTCGA GAAAAGTCAC CTAAAAATAT CGCCATGAGT GCCATATGGG TTAACGATAC CCCCATAGCG ATACATTATT ATTTTTCAGA CGCTACCACA TTATACTTTT ATCAGTCAGG CTGGAACGAA AGCGAGTACT CACATTTGTC ACCCGGATTA ATACTGCATT TATGGACCAT AGAGAATAAT AACAAACCTT ATTACGATTT CATGATGGGC AAAAAAAAAG ACAGTTATAA GGCTAAATTT GCTACCCTAC AACAGCCTAT GTACAATATA ACATTAACTT TTAGCCCCAT TAAGCTATTG TTCTATAGCG TTTTTGAAAA AATTAAAGTT AAGTATCTTA GCGCTTAA
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Protein sequence | MLNARINQSI KCNQVRIHNV ADKITWAELT KIEQLLKIIP QWEKLIKIQT TSKIFNSTSW VASWLETFWQ KNWQLNVLIA WCDDELIAIV PLYYQQNNSI LPMKVLYPLG QGEAEAQEIS TEYTDILINE KFQEHLLPKI QQWILNLKAD QLHWHALLHN SSTRNILADY EQTKSNEATR YIVNGLNWSL ENLSKNMRSR YRRGLNQLDK LNATIDWVEQ SDFDQYWQLM KKLHQKRWQG KNAKGAFCSD EFNQFHAKFR EKSPKNIAMS AIWVNDTPIA IHYYFSDATT LYFYQSGWNE SEYSHLSPGL ILHLWTIENN NKPYYDFMMG KKKDSYKAKF ATLQQPMYNI TLTFSPIKLL FYSVFEKIKV KYLSA
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