Gene CPS_5003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_5003 
Symbol 
ID3518340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp5318634 
End bp5319761 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content35% 
IMG OID637287442 
Producthypothetical protein 
Protein accessionYP_271642 
Protein GI71277755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.403885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAACG CCAGGATAAA CCAATCAATC AAGTGCAATC AGGTGAGAAT ACATAACGTG 
GCGGATAAAA TCACTTGGGC TGAGCTAACT AAAATAGAAC AACTCTTAAA AATAATTCCT
CAATGGGAAA AATTAATTAA AATTCAAACG ACAAGCAAAA TATTTAATTC TACTTCTTGG
GTTGCCTCTT GGCTTGAAAC GTTCTGGCAA AAAAACTGGC AACTAAATGT TTTAATTGCT
TGGTGTGATG ATGAGTTGAT TGCAATTGTA CCTCTTTATT ACCAACAAAA TAATTCAATA
CTTCCAATGA AAGTACTTTA TCCTTTAGGT CAAGGCGAAG CTGAAGCACA AGAAATATCA
ACCGAATATA CTGACATTCT AATTAACGAA AAATTTCAAG AACACTTATT ACCCAAAATT
CAACAATGGA TATTGAATTT AAAAGCTGAC CAACTACATT GGCATGCATT ACTCCATAAT
AGCTCTACTA GAAACATTCT CGCTGATTAT GAACAAACAA AGTCTAATGA GGCCACCCGC
TACATTGTTA ATGGCTTAAA CTGGTCACTT GAAAATCTAT CTAAAAATAT GCGTTCTCGT
TATAGAAGAG GCTTAAACCA ATTAGACAAA TTAAATGCAA CGATTGACTG GGTTGAACAA
AGCGACTTTG ACCAGTATTG GCAACTGATG AAAAAATTAC ACCAAAAAAG GTGGCAAGGT
AAGAATGCAA AGGGCGCTTT CTGTAGCGAT GAATTCAATC AATTTCATGC AAAGTTTCGA
GAAAAGTCAC CTAAAAATAT CGCCATGAGT GCCATATGGG TTAACGATAC CCCCATAGCG
ATACATTATT ATTTTTCAGA CGCTACCACA TTATACTTTT ATCAGTCAGG CTGGAACGAA
AGCGAGTACT CACATTTGTC ACCCGGATTA ATACTGCATT TATGGACCAT AGAGAATAAT
AACAAACCTT ATTACGATTT CATGATGGGC AAAAAAAAAG ACAGTTATAA GGCTAAATTT
GCTACCCTAC AACAGCCTAT GTACAATATA ACATTAACTT TTAGCCCCAT TAAGCTATTG
TTCTATAGCG TTTTTGAAAA AATTAAAGTT AAGTATCTTA GCGCTTAA
 
Protein sequence
MLNARINQSI KCNQVRIHNV ADKITWAELT KIEQLLKIIP QWEKLIKIQT TSKIFNSTSW 
VASWLETFWQ KNWQLNVLIA WCDDELIAIV PLYYQQNNSI LPMKVLYPLG QGEAEAQEIS
TEYTDILINE KFQEHLLPKI QQWILNLKAD QLHWHALLHN SSTRNILADY EQTKSNEATR
YIVNGLNWSL ENLSKNMRSR YRRGLNQLDK LNATIDWVEQ SDFDQYWQLM KKLHQKRWQG
KNAKGAFCSD EFNQFHAKFR EKSPKNIAMS AIWVNDTPIA IHYYFSDATT LYFYQSGWNE
SEYSHLSPGL ILHLWTIENN NKPYYDFMMG KKKDSYKAKF ATLQQPMYNI TLTFSPIKLL
FYSVFEKIKV KYLSA