Gene CPS_4987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4987 
Symbol 
ID3520950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp5303600 
End bp5304331 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content38% 
IMG OID637287426 
Producthypothetical protein 
Protein accessionYP_271626 
Protein GI71280484 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACG AATCATTTAA ATCATTATAC CAGCGTGCCG CCGATCGAAA AGGTGGCAAG 
TTGGCACTTG AGCTATTGCT AGGTAAAAGA ATATTGGGCA AGAAATTACT CGATGATAAC
GCCGCAGAAG AAAGCATTAG CCAACTCACT GACGATAGAG TGTTAGCCGC TTTTACCAAG
CAGATTTTTA AATCTGGTTT TGTGTGGCGA GTGGTTGAGA ATAAATGGCC TGACTTTGAG
GAACATTTTT TTAATTTTAA TATCGAAAAA ATGCTAATGA TGCCTGAAGA AATGTTGGAA
CGAAAAGCAG CAGATCCGAA GATTATTCGT AATTACAATA AAGTAAAGAC TATTAAAGCC
AATGCGCAGA TGATGTTTGA TATCTCACTA GAAAAAAGCA TCAGCTTTGC GCAATTTATT
AATGACTGGC CAAGTGAAGA CATCATAGGC TTGTGGGCTT ATTTGAAAAA GCATGGTCAA
CGCTTAGGTG GTAATACTGG CCCATACGCA CTTAGATTAT TAGGCAAAGA TACCTTCATT
TTAAGCAGTG ATGTTGAAGC TTATTTAAGA GCACAGCAGA TAATTGATGG TGGTTTGCAA
AGTAAAAAAA GCTTAACAGC TATTCAAGCG TTTTTTAATA CATTACAAAC ACAAAGTGGC
TATAACTTAA CGCAATTAAG TCGTTTGATT GCTTTTGCTA GTGGCGATAA TTATGTGCAG
GTTGAGGAGT AA
 
Protein sequence
MTHESFKSLY QRAADRKGGK LALELLLGKR ILGKKLLDDN AAEESISQLT DDRVLAAFTK 
QIFKSGFVWR VVENKWPDFE EHFFNFNIEK MLMMPEEMLE RKAADPKIIR NYNKVKTIKA
NAQMMFDISL EKSISFAQFI NDWPSEDIIG LWAYLKKHGQ RLGGNTGPYA LRLLGKDTFI
LSSDVEAYLR AQQIIDGGLQ SKKSLTAIQA FFNTLQTQSG YNLTQLSRLI AFASGDNYVQ
VEE