Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4987 |
Symbol | |
ID | 3520950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 5303600 |
End bp | 5304331 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637287426 |
Product | hypothetical protein |
Protein accession | YP_271626 |
Protein GI | 71280484 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2818] 3-methyladenine DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCACG AATCATTTAA ATCATTATAC CAGCGTGCCG CCGATCGAAA AGGTGGCAAG TTGGCACTTG AGCTATTGCT AGGTAAAAGA ATATTGGGCA AGAAATTACT CGATGATAAC GCCGCAGAAG AAAGCATTAG CCAACTCACT GACGATAGAG TGTTAGCCGC TTTTACCAAG CAGATTTTTA AATCTGGTTT TGTGTGGCGA GTGGTTGAGA ATAAATGGCC TGACTTTGAG GAACATTTTT TTAATTTTAA TATCGAAAAA ATGCTAATGA TGCCTGAAGA AATGTTGGAA CGAAAAGCAG CAGATCCGAA GATTATTCGT AATTACAATA AAGTAAAGAC TATTAAAGCC AATGCGCAGA TGATGTTTGA TATCTCACTA GAAAAAAGCA TCAGCTTTGC GCAATTTATT AATGACTGGC CAAGTGAAGA CATCATAGGC TTGTGGGCTT ATTTGAAAAA GCATGGTCAA CGCTTAGGTG GTAATACTGG CCCATACGCA CTTAGATTAT TAGGCAAAGA TACCTTCATT TTAAGCAGTG ATGTTGAAGC TTATTTAAGA GCACAGCAGA TAATTGATGG TGGTTTGCAA AGTAAAAAAA GCTTAACAGC TATTCAAGCG TTTTTTAATA CATTACAAAC ACAAAGTGGC TATAACTTAA CGCAATTAAG TCGTTTGATT GCTTTTGCTA GTGGCGATAA TTATGTGCAG GTTGAGGAGT AA
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Protein sequence | MTHESFKSLY QRAADRKGGK LALELLLGKR ILGKKLLDDN AAEESISQLT DDRVLAAFTK QIFKSGFVWR VVENKWPDFE EHFFNFNIEK MLMMPEEMLE RKAADPKIIR NYNKVKTIKA NAQMMFDISL EKSISFAQFI NDWPSEDIIG LWAYLKKHGQ RLGGNTGPYA LRLLGKDTFI LSSDVEAYLR AQQIIDGGLQ SKKSLTAIQA FFNTLQTQSG YNLTQLSRLI AFASGDNYVQ VEE
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