| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4959 |
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| Symbol | |
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| ID | 3521048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5264000 |
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| End bp | 5266120 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637287398 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_271598 |
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| Protein GI | 71280581 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTT CTCCACTCTT TTTAGCCGTC AGTGCGGTTC TCTCTTCAAC AGCAGTTTTT
GCTGACACAG CTGACAGTGC AACTGACAGC TCATCAAATA AACAGGCTAT GGAAGTCATT
GAAGTAAAAG GTAGTTATTT CCATGGTTAT AAAGTTGATG AAGCTAATGG AGCTATGCGC
GGTAACTTTT CCTTATTAGA AACAGCACAA TCGGTCACCG TTATTCCTGA TACCATAATA
AACGAGCAAT TAGCCACTAC GTTAGGCGAA GTACTCGTTA ATGACGCTAG TTTAACCGCT
GGTTCAAAAC AACGTAACCG TGAAGTCTTT AGTCTACGTG GCTTTGAATT AAGCTCATCA
AATGGTTATT TACGCGATGG TCATCAGCAT TGGTCTCATT ATCAACAACC TATTGAAACA
CTGGAAAGTA TTGAAGTAAT AAAAGGACCT TCAAGCATAT TATACGGTCA ATCAGGCCCC
GGTGGTTTAG TTAACATGGT GACAAAAAAG CCTACCGCTA ATAGTATTTT TAACCTAGGT
GTCGATTTTG ATCAAGAAGG TTCATCCCGT ATAACGTTAG ATGCCGGTGG TGCCATAACA
GAAGATGAAT CACTGCGTTA TCGCGCTAAT TTAGTTAAAC AAGATGTGAC TTACCAACGT
GAATATCAAA ATGGCGAACA AAGAGAACGT GAACGTTTCC TTGGCGCACT GGTAGTTGAT
TATGATGTGA ATGAGGATTT ACTCGTTAGC TTTCATTACG ATAGAACCAA TGACAAAGCG
GGTTTAGATA CTGGTGCTTG GCTTGATGAT AACGGCGATG TTATTGGTGA TGATAAAACT
ATTCGTGATA TGTCATGGGC TTTTACCGAC ATCACAGTAG AAAATTACGG TGTTGATGTT
AGTTATATTT TAAGTGATGC CTGGCAAGTA AAAGTTGGTT ATAACGAACA AACATTCGAG
CGTCAGCGTT TTGAATCTGC TCCGAACAAA CCGAGTGATT TTGTAGAGGG CGATAGCTAT
ACCTCAAATC CATATGACCG TTATGATGAT TGGCAATTTA CTACTACGTT TATAGATTTT
ACCGGTGAAT TTGAACTGGC AGGTGTAGAA CATAATTTAC TTATTGGTGC TAACTATCTT
GACTATTATT ATGGCCAACT AAGAACAAAG AATAAGTCAG ACTCGTTTGA ATATTCTGCA
GGGCAAGTTG AACCATCCCG CCCTGATATC AGCTATGCAA CTGATGACAG CTTATATACC
AGCGAATACA ATTATTATGG TATTTATATC CAAGACTTAA TCACTATTAA CCAAGAATGG
CAGGTGATGA TTGGTGGCCG TTACGATAAA CAAAGCAAAA CAGGTGCTGA TAATGAGTCG
GTATTACCTA AAGCGGGTCT ACTATATCAC CCGAATGATA GTGCTACCTT CTATGGCAGT
TATAGTGAAG GTTTTGAGCC GCAAAGTAGT GAAACCATTA ATGATAAAGA TGATTTTAAC
CACGGTATGG AGATCGATGC CGAGACTTCG AAGCAATACG AAGTTGGTGT AAAATGGCAA
TTATTCGATG ACCGCTTACT GTTAACGTCT GCACTATTCG ACATCACTAA ATCGGGCGTA
CTAGTAACCG AAGACTATGA AAGCGTGGAT GAAAATATCA CTAAAATTAC TACGCAAGCA
GGTGAACAAC GCCACAAAGG TTTTGAAGTA GCGGCACAAG GCGCGGTAAC CGATAAATTA
TTTATCATGG CATCTATGAT GAACTTGGAT GCCGCCTATG GTACAGATAG TCAGTTTAAT
GGCTCAACGC CTGTAGATGC GCCAGAGTGG TCAGCCTCCG TTTGGTCACG TTATGAATTG
ACTGAAAACT TTTCTATTAA TGCCGGTGCT TTTTATGAAG GCGAACGTTT TGCTAATACC
GATAACACCA TAGTAAAAGA TGCTTATACC CGTGTTGATG TGGGTGCTAC TTATAAAATA
GTCTTACAAA ATACCGATAT TAACTTACGT TTTAACGTGC AAAACTTATT TGATACTGAT
TACCTCGCTG GTGGCGGAGT GTCTAACGTG ACAGTGGGAG ATGGCAGAAA CTTCCGTCTT
GCCATGCAGA TTGCTTTTTA A
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| Protein sequence | MKFSPLFLAV SAVLSSTAVF ADTADSATDS SSNKQAMEVI EVKGSYFHGY KVDEANGAMR
GNFSLLETAQ SVTVIPDTII NEQLATTLGE VLVNDASLTA GSKQRNREVF SLRGFELSSS
NGYLRDGHQH WSHYQQPIET LESIEVIKGP SSILYGQSGP GGLVNMVTKK PTANSIFNLG
VDFDQEGSSR ITLDAGGAIT EDESLRYRAN LVKQDVTYQR EYQNGEQRER ERFLGALVVD
YDVNEDLLVS FHYDRTNDKA GLDTGAWLDD NGDVIGDDKT IRDMSWAFTD ITVENYGVDV
SYILSDAWQV KVGYNEQTFE RQRFESAPNK PSDFVEGDSY TSNPYDRYDD WQFTTTFIDF
TGEFELAGVE HNLLIGANYL DYYYGQLRTK NKSDSFEYSA GQVEPSRPDI SYATDDSLYT
SEYNYYGIYI QDLITINQEW QVMIGGRYDK QSKTGADNES VLPKAGLLYH PNDSATFYGS
YSEGFEPQSS ETINDKDDFN HGMEIDAETS KQYEVGVKWQ LFDDRLLLTS ALFDITKSGV
LVTEDYESVD ENITKITTQA GEQRHKGFEV AAQGAVTDKL FIMASMMNLD AAYGTDSQFN
GSTPVDAPEW SASVWSRYEL TENFSINAGA FYEGERFANT DNTIVKDAYT RVDVGATYKI
VLQNTDINLR FNVQNLFDTD YLAGGGVSNV TVGDGRNFRL AMQIAF
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