Gene CPS_4949 details

Gene Information

• Locus tag: CPS_4949
• ID: 3518435
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 5249999
• End bp: 5251831
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637287388
• Product: serine/threonine protein kinase
• Protein accession: YP_271588
• Protein GI: 71278977
• COG category: [K] Transcription; [L] Replication, recombination and repair; [R] General function prediction only; [T] Signal transduction mechanisms
• COG ID: [COG0515] Serine/threonine protein kinase; [COG0631] Serine/threonine protein phosphatase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACTG ATCAAAACGC TTATACAAAA CAAGCTGCTC AGGCGCCTCC TTTAACGCCA 
GCAATACCGC TAACACAGGC AAAATTACAG GTGTTTTTGG GCGGTCATAG TAATGCGGGT 
ATAAAAGCAA CCAATGAAGA TGCTTTTGCT TCACTAGTGC CCAAAGATGC AGAATTAACG 
GCTAAAGGTG TTGTTGCTGT CATTGCTGAT GGTGTATCAA GTGCCAGTAA AGCAGCGGAG 
GCAGCGCAAT TATCAGTGAC ACAATTTATT AATGACTATT ACGCAACGCC GCAAACGTGG 
TCAACACAAA AGTCTGCTAG TAAGGTGTTA TCTAGCTTAA ATCAATGGTT ATATGCACAA 
ACCGATGCGG TTTCTGGTTA CACATTACAA TGGTTAACAA CCTTTTCAGC ATTGATAGTC 
AAATCGTCTA CCGCCTATAT TTTTCATGTC GGTGATACGC GTATCAGCCA GTATCGGCAA 
CACGAGCTAG AAGTACTAAC TAAGGACCAT CAACAAAAGC AGGGACCATC TCATAGTGTG 
TTAACCCGAG CTTTGGGCGC TGATCATCGA TTGCAAGTTG ATGTGCAGCA AGTTGCTATT 
CAAGCGGGTG ATATTTTTGT ACTTACTTGC GATGGCGTTC ATGAATATTT ATCAGCTCAA 
CAAATAAAAA AACAGTTAAA TCAATTGCCA CAGTCGCCTA GCACGCAAGC GTTAGAGCAG 
ATGGCGAAAT TACTGACGGA ATTAGCGATA AAGAAGGGTA GTAAAGATAA TGTCAGCTGT 
TTATTAGTTT ATATCGGCGG TACGCCTAAT AGGGCGTTAG TCGAAATTGA ACGAGAACTG 
TTAAATAAAG CGATACCACC AGCGTTAGCG GTTGGTAATA GTATTGATGA CTATGAAATT 
TGCAAAGTTA TTCATGCCAG CATTCGGTCA CATTTATATT TAGCGAAACA CCCTAATGAG 
TCTGAGCCTT GTGTTCTTAA GGTTCCTTCA AAAAACCTCG CTGATGATAG TAGTTATTTA 
CAAGGTTTCA TACGTGAAGC TTGGCTAGGG GAAAGGTTAA GCAATAGTCA TGTGATGAAA 
ATAAAACGTG GCAGCGAGAA TAGTCGCTTT CTTTATCATA TTTGCGAATA TATTGATGGC 
CAAACATTAG GGCAATGGAT GTTTGATAAT CCAAAACCTA ATCTTGCACA AGTACGTGAT 
ATTGTCGGGC AAATTATTAT CGCCTTACGT TCATTTCAGC GCTTAGAAGT TATTCATCGG 
GATTTAAAGC CTGACAACAT AATGATTGAT TCTTACGGCA AGGTTTTTCT CATTGACTAT 
GGCACTGCGC TTATTGCATC ACTGGCTGAA AATAATGATG TTGTTACCGA AACTGTGCCA 
CAAGGCACAT TGAATTATAT CGCACCAGAA ACCTTATTAA CTTTACATGC TGACCACCAA 
AGCGATTTAT TTTCCTTAGG CGTTATCACC TATGAAATGC TTTGTGGAGA ATTGCCTTAC 
AAGCCGATGC AAAGAGCTGA TATGCACAGC TACACTGTTG ATGACGAAAA AAGTCGCGTA 
GAAAATTATT CACAGTGGCA GTATCGTAGT ATTAGACAAT TTCGCAGCGA TTTACCTTTC 
TGGCTTGATA TGGTGCTGTC AAAAGCGACA CAAGCCGATC CTAAGTTTCG TTTACAGGCG 
TATTCTGAAT TTAAAGCTGA TTTAAGCAAA CCGACGGCTT CGGCATTGGA AGAATATAAA 
AGTCAGCCTA TCTTACAGCG TAATCCGGTA TTGTTTTGGC AAGGAGCTAC CGCGTTATTT 
TTTATCTTAT GGTTATCAAC GATATTTTTC TAA 

 

Protein sequence

MKTDQNAYTK QAAQAPPLTP AIPLTQAKLQ VFLGGHSNAG IKATNEDAFA SLVPKDAELT 
AKGVVAVIAD GVSSASKAAE AAQLSVTQFI NDYYATPQTW STQKSASKVL SSLNQWLYAQ 
TDAVSGYTLQ WLTTFSALIV KSSTAYIFHV GDTRISQYRQ HELEVLTKDH QQKQGPSHSV 
LTRALGADHR LQVDVQQVAI QAGDIFVLTC DGVHEYLSAQ QIKKQLNQLP QSPSTQALEQ 
MAKLLTELAI KKGSKDNVSC LLVYIGGTPN RALVEIEREL LNKAIPPALA VGNSIDDYEI 
CKVIHASIRS HLYLAKHPNE SEPCVLKVPS KNLADDSSYL QGFIREAWLG ERLSNSHVMK 
IKRGSENSRF LYHICEYIDG QTLGQWMFDN PKPNLAQVRD IVGQIIIALR SFQRLEVIHR 
DLKPDNIMID SYGKVFLIDY GTALIASLAE NNDVVTETVP QGTLNYIAPE TLLTLHADHQ 
SDLFSLGVIT YEMLCGELPY KPMQRADMHS YTVDDEKSRV ENYSQWQYRS IRQFRSDLPF 
WLDMVLSKAT QADPKFRLQA YSEFKADLSK PTASALEEYK SQPILQRNPV LFWQGATALF 
FILWLSTIFF