Gene CPS_4926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4926 
Symbol 
ID3518675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp5216701 
End bp5217279 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content38% 
IMG OID637287365 
ProductmerR family DNA-binding response regulator 
Protein accessionYP_271565 
Protein GI71277797 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATATCA GTAAAAAGTC TCTGTTAACC CCTGCAGAAG CGGCTAAATT GTTACATGTT 
GCGCCAACGA CCATTCGTCA TTGGGCTCAA ATTGGTCGAT TACCTTTTAT TTCTACACCC
GGTGGACATA GGCGGTTTGA TCGAAATGAC ATTTTATCTT TAATGTCTAC CCCCAAAATC
AATGTAAAAA ATGATTTTTC TATCTTGATC ATTGAAGATG ATAAAGAGTT TGCAGACATG
CTCACTCAGT TTCTAGAAAA CCTTTTTCCC TACGCTAAAA TAAAAATAGC TTACAATCCT
TTTGATGCAG GTGATTTGCT GCATACTGTT AAGCCTGATG TCGTCATGCT AGATTTAATG
ATGGTAGGGA TGGATGGATT CTCTATTTGT CACCGCATTA AAAGTACGCC AGCAACCGCA
AATATTATAG TTATTGCAAT GACTGGCGCA TTAACTGATG ATAATGTGAG TAGGATAGTT
GCATTAGGGG CTGAAACTTG TTTTGGAAAA CCGCTTAACT TTACGCTTTT AGAAAAGACA
ATCAAACAAC TTGTCGAGCA AAAAAAGGCG ACCTCCTAA
 
Protein sequence
MDISKKSLLT PAEAAKLLHV APTTIRHWAQ IGRLPFISTP GGHRRFDRND ILSLMSTPKI 
NVKNDFSILI IEDDKEFADM LTQFLENLFP YAKIKIAYNP FDAGDLLHTV KPDVVMLDLM
MVGMDGFSIC HRIKSTPATA NIIVIAMTGA LTDDNVSRIV ALGAETCFGK PLNFTLLEKT
IKQLVEQKKA TS