Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4926 |
Symbol | |
ID | 3518675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 5216701 |
End bp | 5217279 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637287365 |
Product | merR family DNA-binding response regulator |
Protein accession | YP_271565 |
Protein GI | 71277797 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATATCA GTAAAAAGTC TCTGTTAACC CCTGCAGAAG CGGCTAAATT GTTACATGTT GCGCCAACGA CCATTCGTCA TTGGGCTCAA ATTGGTCGAT TACCTTTTAT TTCTACACCC GGTGGACATA GGCGGTTTGA TCGAAATGAC ATTTTATCTT TAATGTCTAC CCCCAAAATC AATGTAAAAA ATGATTTTTC TATCTTGATC ATTGAAGATG ATAAAGAGTT TGCAGACATG CTCACTCAGT TTCTAGAAAA CCTTTTTCCC TACGCTAAAA TAAAAATAGC TTACAATCCT TTTGATGCAG GTGATTTGCT GCATACTGTT AAGCCTGATG TCGTCATGCT AGATTTAATG ATGGTAGGGA TGGATGGATT CTCTATTTGT CACCGCATTA AAAGTACGCC AGCAACCGCA AATATTATAG TTATTGCAAT GACTGGCGCA TTAACTGATG ATAATGTGAG TAGGATAGTT GCATTAGGGG CTGAAACTTG TTTTGGAAAA CCGCTTAACT TTACGCTTTT AGAAAAGACA ATCAAACAAC TTGTCGAGCA AAAAAAGGCG ACCTCCTAA
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Protein sequence | MDISKKSLLT PAEAAKLLHV APTTIRHWAQ IGRLPFISTP GGHRRFDRND ILSLMSTPKI NVKNDFSILI IEDDKEFADM LTQFLENLFP YAKIKIAYNP FDAGDLLHTV KPDVVMLDLM MVGMDGFSIC HRIKSTPATA NIIVIAMTGA LTDDNVSRIV ALGAETCFGK PLNFTLLEKT IKQLVEQKKA TS
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