Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4919 |
Symbol | |
ID | 3519783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 5209974 |
End bp | 5210471 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637287358 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_271558 |
Protein GI | 71279328 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTTA TGAATAACGC TAAAACGGCA CCCCTTGATA ACTTCGATCG CAAAATATTA GAAATTGTTC AGCAATCCAA TAGAGAAACC TCTGATCGAA TAGCGGAACA AATTGGTCTC TCTCCTGCGG CGGTACAACG GCGCATGAAA CGAATGCGTG AACAAAATGT AATTCAGGCA GATGTCTCGG TTGTTAACCC ACAAGCAGTA GGTCTTGGTG TTACTATTGT TGTAGAAGTA ACATTAGAGC GAGAGCGCTC CGACTTACTT GACTCGTTTA AAAAAGAAAT GATAAGCAAC CCAGCTGTTC AGCAGTGCTT TTACGTAACT GGCAGTGCTG ACTTTATTTT GATCGTTACG GCGGTTGATA TGGATGACTA CGAATCTTTT ACGCGCGATG TGTTTTTTGA AAATCACAAT GTTCGTAATT TTCAGTCAAA TGTAGTGATG AATCACGTAA AAAAAGGCCT TACGGTGCCT GTTAATCTCG AAGATTAA
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Protein sequence | MSLMNNAKTA PLDNFDRKIL EIVQQSNRET SDRIAEQIGL SPAAVQRRMK RMREQNVIQA DVSVVNPQAV GLGVTIVVEV TLERERSDLL DSFKKEMISN PAVQQCFYVT GSADFILIVT AVDMDDYESF TRDVFFENHN VRNFQSNVVM NHVKKGLTVP VNLED
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