| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4912 |
|---|
| Symbol | |
|---|
| ID | 3519404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 5202010 |
|---|
| End bp | 5202906 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637287351 |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_271551 |
|---|
| Protein GI | 71279085 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAGTA AACAAAATCA ATCTAAGCAA ATGACAGGGA TGCTCTATAG CTTATTAGGT
GTATTGTTAT TGACGCCTGA CGCGTTAATT TTGCGTTGGG TCACCATCGA ACATAGTGAA
GTATTATTGT GGCGTGGCAT ATTTTTTTCA CTTGGTTTTT CTTTTATCGT ATTGGTTCGT
CATCGCAGCA ACGCAGTGCG TGCACTCATT AATGCGGGAT GGCCCGGCAT TATCACTGGC
TTTTTCTTCG CGATGAATAC TTACTGTTAT ACGCAGGCAT TGCAACAAAC TGGCGCAGCA
ACAGCAATGA TGATTATCAG TACCGCGCCC GTTTTTGCAG CATTGATCGC CTGGTTATGG
TTAGGCGAAC GAATTAGTTT ACCTGTTGGA CTTACGATTA CAATGACTTT ACTCGGTATG
GCTATTATTG TCAGCGATGG TGATGACGGC AATAGTTTAT TTGGTAACAT GATGGCTATG
GGGTGTGCCA TTTTTATGGC AATAAACTTT AACTGGGCAC GACGATACGC TTCACTGGAT
ATTACACCGG GACTTATTTT TGGTGGTTTA TTTATTATTG CACTTGGCTG GTTCAATACC
AGTGTAGTGG CGGCGAGACC TGACGAAATA GGTGCTATGT TTCTTTCTGC GGCGATTGCT
ATGCCTATTG GGTTTGTTTT ATTACAAATT GCGCCACGTT ATATCAGTGC TACGGAAGTC
AGTTTGTTTT TATTGTTAGA GTCGATTATT GCGCCAATAT GGGTGTGGCT GGGGTTGGGT
GAAACGCCAA GTAACATAAC CTTATTAGGT AGTGTTATTG TCTTAGTTGC ATTGCTCTTG
TATTGCTATG TTGTGCGTTT GAAAGCACAA ACGATATTAA CCACTAAAGA GGCCTAA
|
|---|
| Protein sequence | MKSKQNQSKQ MTGMLYSLLG VLLLTPDALI LRWVTIEHSE VLLWRGIFFS LGFSFIVLVR
HRSNAVRALI NAGWPGIITG FFFAMNTYCY TQALQQTGAA TAMMIISTAP VFAALIAWLW
LGERISLPVG LTITMTLLGM AIIVSDGDDG NSLFGNMMAM GCAIFMAINF NWARRYASLD
ITPGLIFGGL FIIALGWFNT SVVAARPDEI GAMFLSAAIA MPIGFVLLQI APRYISATEV
SLFLLLESII APIWVWLGLG ETPSNITLLG SVIVLVALLL YCYVVRLKAQ TILTTKEA
|
|---|
| |