| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4905 |
|---|
| Symbol | |
|---|
| ID | 3520136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 5195021 |
|---|
| End bp | 5195575 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637287344 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_271544 |
|---|
| Protein GI | 71279676 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATG AACTATTTAA TTTAATCGAG CGTTTAGCCA ATTTATTACG GCAAGAAACG
CGACTTGAAG GGCAAAGCTT AGGGTTACAA CCTATACAGC AAGAGGCTTT GTATTACCTA
TCGACTTGTA ACCGTTACTC AGATACCACC TTAGCGGTCA CTGAGTTTTT AGGGTTAACC
AAAGGCACGG TATCACAATC GTTAAAAATT CTGGAAAGCA AAAGCTTAAT TGCTAAAGTA
AAAGACAAAA AAGATAAACG CATTACCCAT TTAAAAGTAA CTGAAACCGG TCGCGAGTTT
TTAATGAAAA CTTGCCCTCC ACAAAAGTTT ACTGATGCTA TTGCCGGTTT GTCTGTTGAT
GAGGAGTTTG AAACCAAAAC ATTACTTAAA AAAGTATTAA GTAACTATCA ACTCGCTACT
GGTCGAACTG CCTTTGGGGT CTGCAAGCAT TGTAAATTTA ATCGCAAGAC CAGTGACGGC
ATTTTATGTG ATTTAACCAA AGAAGCTTTA AGCAGCGATG ACATCATGCT TATCTGCAGA
GAATATGTCG TTTAA
|
|---|
| Protein sequence | MNDELFNLIE RLANLLRQET RLEGQSLGLQ PIQQEALYYL STCNRYSDTT LAVTEFLGLT
KGTVSQSLKI LESKSLIAKV KDKKDKRITH LKVTETGREF LMKTCPPQKF TDAIAGLSVD
EEFETKTLLK KVLSNYQLAT GRTAFGVCKH CKFNRKTSDG ILCDLTKEAL SSDDIMLICR
EYVV
|
|---|
| |