| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4810 |
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| Symbol | |
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| ID | 3520279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5102730 |
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| End bp | 5103665 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637287249 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_271449 |
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| Protein GI | 71279818 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTAT TAAGTTTATT AATTGCATTA GCAGCCGATC GATCTTTATC TGCAAAAGTA
TGGCAATTTA ATTTTTATTA CCAACATTAT CACCATTTTT TTAGCAAAAA CTTTACTGCT
AAGCAAGGTA CTACCGCTAG TGCAGTGTTT ATTATCTTGC CAGTTATTGC GACATACCTA
TTACTTGACG TTATTGATAA CTCCGTACTG CAACTATTAT TTTCTACCGT GATACTTATT
GTTTGTTTTG GTTGTACCAC CACTAGAAAG AGCTACAAGA GTTATTTGCA TTCTGCTTTT
CGTGGTGAAG AAACGACGAC AGAAATGCAT CACGAGCAAT TATTATCAGA TAAAAATTTG
CCAGAGATGG GCTTCGGCCA AGCACTTATT TGGTTAAACT ACCGTTATTA CATTGCTATT
ATGCTGTTCT TCACCGTTTT TGGTGCTGCT GGCGCGGTAT TTTACCGTTT GTTAACGACA
GTTATTGAAC ATAAAAAAGC AAAATGTATG GCTAGTGCCG CTGAAAATAA AGCTCAAGCA
GAAGTCAGTT CAGTAGATGA AAGCGACATT GAATCTGAAG AGCATCATCA AGCTGTTCAT
GAGGGTAACG TTGCGCCAAA TATCATGAAT GGCTGTCAAA ACCATCATGA TGTACTTTTT
TGGTTAGACT GGTTACCTGT GCGTATAGCT TCTTTCGGTT ATATGTTTGT CGGTCACTTC
TCCAAAGCGA TGCCTGTTTG GTTAGAAAGT TTGTTTGATA GTCAAAAACC AACCCATCAA
GTTTTAATTG ATGTTGCAGA AAAATCGGAA GACCTTTTGG TAAACGAAAA CGATTGCACA
GCAGAACCTT GTTTACTCGT TAGACTGGCA AAACGTAATG TTCTACTTGT CCTTGCCGTT
ATTTCAATCT TGACGCTTAG TGGCCTGCTT AATTAA
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| Protein sequence | MSLLSLLIAL AADRSLSAKV WQFNFYYQHY HHFFSKNFTA KQGTTASAVF IILPVIATYL
LLDVIDNSVL QLLFSTVILI VCFGCTTTRK SYKSYLHSAF RGEETTTEMH HEQLLSDKNL
PEMGFGQALI WLNYRYYIAI MLFFTVFGAA GAVFYRLLTT VIEHKKAKCM ASAAENKAQA
EVSSVDESDI ESEEHHQAVH EGNVAPNIMN GCQNHHDVLF WLDWLPVRIA SFGYMFVGHF
SKAMPVWLES LFDSQKPTHQ VLIDVAEKSE DLLVNENDCT AEPCLLVRLA KRNVLLVLAV
ISILTLSGLL N
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