Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4775 |
Symbol | |
ID | 3522833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 5059958 |
End bp | 5060773 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637287214 |
Product | cation channel family protein |
Protein accession | YP_271419 |
Protein GI | 71282360 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATAT CTGCACACAA CAGCAAACTA CAAAGGTTTG TTGAAAGTAA AAAATTCCAA AGTTTTCTTA TTTTTCTTAT CCTCTTTAAT GCAATTAGTC TGGGCCTTGA AACAAGCCAG TTTGGTAAAG CTAATGCTGA GCTTTTACAC ACCATAGATA CGACCATCCT AGTACTGTTC ACAATTGAGC TTTTATTAAA ATTCATTGTT TATCGAAATC AATTTTTTCG TTCAGGATGG AACTGGTTTG ATTTTATAAT CGTTGCCATT TCCTGGGCAC CTACAAGCGG TGCATTATCG GTTTTACGCG CCTTTAGAAT ATTGAGAGTT TTACGGTTAC TTTCTGTCGT TCCGCAAATG CGTCGTGTGA TAGGCGCCCT AGGGCATTCA TTACCAGGTA TGGCTTCAGT AGTTGGTGTC TTGAGTATTA TATTTTATGT GTCCGCTGTA CTAACCACTA AGATATTTGG CACTCATAGT GATGCGAACA TGCAGGAATG GTTTGGCAAC ATTGGGGCTT CTGCTTACAC CTTATTTCAG GTAATGACAT TAGAGAGTTG GTCTATGGGG ATAGTTCGTC CAACCATGGA GTTATTTCCC CTCTCTTGGG TATTCTTTGT ACCCTTTATC ATTATTACCA GCTTCGCAGT CCTTAACTTA TTTATTGGTA TTATAGTTGA TGCGATGCAA GTCATGCATG AAGAAGAAGG TAAACCTAAA CAAGTCATAG CAACTAAAGA AGATATGTTA ATACTTGAAC AAAAAATTGA TAAACTAAAT CAATTACTAC AGAGTAAATC TAAGCCTGAT AAATAG
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Protein sequence | MSISAHNSKL QRFVESKKFQ SFLIFLILFN AISLGLETSQ FGKANAELLH TIDTTILVLF TIELLLKFIV YRNQFFRSGW NWFDFIIVAI SWAPTSGALS VLRAFRILRV LRLLSVVPQM RRVIGALGHS LPGMASVVGV LSIIFYVSAV LTTKIFGTHS DANMQEWFGN IGASAYTLFQ VMTLESWSMG IVRPTMELFP LSWVFFVPFI IITSFAVLNL FIGIIVDAMQ VMHEEEGKPK QVIATKEDML ILEQKIDKLN QLLQSKSKPD K
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