| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4671 |
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| Symbol | potF2 |
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| ID | 3521843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4937121 |
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| End bp | 4938206 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637287110 |
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| Product | putrescine ABC transporter, periplasmic putrescine-binding protein |
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| Protein accession | YP_271315 |
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| Protein GI | 71281371 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.728612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA AAAGTATATT ACTAATAACA ACAATGCTTG CTTCACTGGC CGCATCTGCA
TCAGATAAAG TAGTTAACGT TTATAACTGG TCAGATTATA TTGACCCTGC AGCGATTAAA
CAGTTTGAAA AAGAAACCGG TATCAAAGTT AACTACGATG TTTATGATTC TAATGAAATC
CTCGAAGCTA AGCTGATGGC CGGTGGTTCA GGTTATGATG TTGTGGTACC AACAGGTTCA
TTTTTAGAAC GCCAAGCAAA AGCAGGTATT TACGCACAAA TCGATAAAAA CAACCTGTCC
AATTACAATA ACATTGATAA AGCAATGGCT GGTAAAATGG CGCTTCATGA TCCAGGTAAC
AAGCACAGTG TGCCGTATAC TTGGGGAACG ATTGGTCTAG GTATTAATAC TGATATGGTT
AAAGCACGCT TAGGTGATGT GGAACTTAAT AGCTTAGATC TTATCTTTAA GCCTGAAGTC
GCAGCTAAGC TAGCTGATTG TGGTATTGGT ATTTTAGACT CACCTGCTGA AGTTATGTCT
ATCGCGTTAA ACTACGCAGG TTTAGATCCT AACTCTGAAA GTGATAAAGA TCTTAAAGCA
ACTAAAGCGA TGATTAAAAA GGCTCGCCCT CATTATAAAT ATTTTGACTC AAGCCGCCTG
ATTGCTGATT TAGCCAATGG CGATATTTGT GTTGCGTTAG GTTATAACGG CGATATGTTG
CAAGCTAATA GTCGTGCAAG TGAAGCTGGA CAAGGCGTTA AAGTTGAGTA CCTAATTCCT
AAAGAAGGCA CCATTGCTTG GTTCGATATG ATGGCAATTC CTGCTGATGC GCCTCACAAG
AAAGAAGCTT ATGCCTTTAT CAACTTCATC TTAAAAGCTG AAACAGGTGC TGGTATTTCT
AACTATGTTT ATTATGCTGT TGCTAATGAA GCTGCTACTA AGTTTGTTAA TGACGACATT
AAATCTAATA TCGGTATTTA TCCGGTTGGC GAAACAAAAG AAAATCTGTT TTCTCAACTC
GCTCACACCT CGCGTTTTGA CCGTAAATTA ACGCGTGCTT GGACACAAAT CAAAACAGGT
AGATAG
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| Protein sequence | MKKKSILLIT TMLASLAASA SDKVVNVYNW SDYIDPAAIK QFEKETGIKV NYDVYDSNEI
LEAKLMAGGS GYDVVVPTGS FLERQAKAGI YAQIDKNNLS NYNNIDKAMA GKMALHDPGN
KHSVPYTWGT IGLGINTDMV KARLGDVELN SLDLIFKPEV AAKLADCGIG ILDSPAEVMS
IALNYAGLDP NSESDKDLKA TKAMIKKARP HYKYFDSSRL IADLANGDIC VALGYNGDML
QANSRASEAG QGVKVEYLIP KEGTIAWFDM MAIPADAPHK KEAYAFINFI LKAETGAGIS
NYVYYAVANE AATKFVNDDI KSNIGIYPVG ETKENLFSQL AHTSRFDRKL TRAWTQIKTG
R
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