| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4659 |
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| Symbol | dsdA |
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| ID | 3520861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4921822 |
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| End bp | 4923153 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637287098 |
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| Product | D-serine dehydratase |
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| Protein accession | YP_271303 |
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| Protein GI | 71280395 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3048] D-serine dehydratase |
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| TIGRFAM ID | [TIGR02035] D-serine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.347338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACG ATAACATTGC ACAGCTAATA GCTGACTTTC CCCTCATAGA AAAAATGGTC
GAACTAAAAG AGGTAAGCTG GTTTAACCCT AATATTACTT CGCTGCAAGA AGGCCTTCCT
TATGTCGGAC TTGATAACAA TAATATTCAA GATGCCAGTG ACCGATTAGC ACGTTTTGCC
CCCTACATGG TAAAGGCATT TCCCGAAACG GCGATAACCA ATGGCATTAT TGAATCTGAC
GTAGTTGAAA TTTCAGCAAT GAAATCGCAA CTAGAGCAGC AATATGAAGT AGAAATTCAA
GGTAAACTGC TGCTAAAAAA AGACAGTCAC CTGCCCATTT CAGGTTCAAT CAAAGCGCGT
GGTGGCATTT ATGAAGTATT GACACATGCT GAACAACTAG CAATAAAAGC AGAGGTGCTT
GAGCTTTCAG ATGATTACAG TAAGCTATTT ACCGAAGAGT TTAAGTCCTT TTTTAGCCAG
TACAGCATCG CTGTTGGTTC AACGGGAAAC CTTGGTATGT CTATTGGTAT TATGAGTGCA
AAACTGGGTT TTTCAGTTAG CGTGCATATG TCTGCAGACG CGCGCCAATG GAAAAAAGAA
AAACTCCGTG CTCATGGTGT TAATGTTGTT GAGTACAACG AAGACTACAG TGTGGCTGTA
GAGCAAGGTC GCCAGGAAGC TGAAAATGAT CCCAAGTGCT TCTTTATCGA TGATGAAAAC
TCCCAAACAC TCTTTTTAGG CTACTCCGTT GCCGGTGAAA GACTGAAACA ACAGTTTGAT
GCTATGCATA TTGTGGTAGA TGAAAATAAT CCACTATTTG TCTACCTGCC CTGCGGCGTC
GGTGGTGGTC CTGGTGGCGT AGCATTTGGG CTGAAGATGG CTTTTGGTGA CAACGTGCAT
TGTATATTTG CCGAGCCAAC ACATTCCCCT TGCATGTTAC TTGGAATTCT CACTGGATTA
CATGATGGCA TTGCCGTTCA AGATATCGGC ATCGATAATA TTACCGCTGC TGATGGCCTG
GCTGTTGGAA GAGCTTCTGG CTTTGTTGGC CGGGCAATGG AAAGACTGTT AGATGGTTTT
TATACCATCA GCGATCAGAG AATGTATGAT CTGCTTGGGC TATTAAATAA GGTAGAAGGT
ATTCAATTAG AGCCATCGGC ATTGGCTGGT ATGTTAGGCC CTATTGTTGT AACTAATAAT
GATGAATATC TTAAGCGTAT AAACATGAGC AATGAAAAAT TGGTAAACGC AACACACCTT
ATTTGGGCAA CGGGTGGCGG TATGGTTCCA GCGATAGAAA TGGAAAAATA TCTATCAAAA
GCTGGCAGTT AA
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| Protein sequence | MNNDNIAQLI ADFPLIEKMV ELKEVSWFNP NITSLQEGLP YVGLDNNNIQ DASDRLARFA
PYMVKAFPET AITNGIIESD VVEISAMKSQ LEQQYEVEIQ GKLLLKKDSH LPISGSIKAR
GGIYEVLTHA EQLAIKAEVL ELSDDYSKLF TEEFKSFFSQ YSIAVGSTGN LGMSIGIMSA
KLGFSVSVHM SADARQWKKE KLRAHGVNVV EYNEDYSVAV EQGRQEAEND PKCFFIDDEN
SQTLFLGYSV AGERLKQQFD AMHIVVDENN PLFVYLPCGV GGGPGGVAFG LKMAFGDNVH
CIFAEPTHSP CMLLGILTGL HDGIAVQDIG IDNITAADGL AVGRASGFVG RAMERLLDGF
YTISDQRMYD LLGLLNKVEG IQLEPSALAG MLGPIVVTNN DEYLKRINMS NEKLVNATHL
IWATGGGMVP AIEMEKYLSK AGS
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