| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4658 |
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| Symbol | dsdC |
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| ID | 3522931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4920634 |
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| End bp | 4921593 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637287097 |
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| Product | DNA-binding transcriptional regulator DsdC |
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| Protein accession | YP_271302 |
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| Protein GI | 71282457 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02036] D-serine deaminase transcriptional activator |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.868216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATACTC AAGACAATGT TATCTCTAAC AATAAACGGT TAAGCAGTTT TCAACTGTCT
AAAATGCATA CCTTTGAAGT GGCCGCTAGG CACTGTTCTT TCTCTCTTGC GGCGGAAGAG
CTGTCGATGA CGCCAAGTGC CATATCTCAT CGAATAAATG CCTTGGAGAG CGAATTAGGT
ATTTTGTTAT TTAAACGCTC ACACCGAAAA ATTGAGTTAA CCAAGGAAGG TGAACGCATT
TATATCGCGG TAAAATCCTC ATTTAGTAGC TTAAATCAGG AAATACTCGA GGTAAAAAGC
AATGAAATTT CTGGAGAGTT AACTGTTTAT TCTCGACCTT CTTTTGCGCA ATGCTGGTTG
GTGCCTAGAA TTGCCGGTTT TCAAAAGCAA TACCCTGCTA TTTCACTCAA CATCTTGACG
GGAAATGAAA ATATCAACTT TCATGGACAT GGCATTGATG TAGCAATTTA TTTTGATGAA
AAACAACCGA GTAAGTTATA TTGTCAAGAT ATTATGACAG AGACGATAGT ACCGGTATGT
AGCCCAGAGT ACGCTGAAGA ATTTGATTTA ATAGGCAAGA TTAATAATTT AAGTCAGTGT
ACGTTGTTAC ATGATAACCA AGCATGGGGA TATGATTCCA ACACAGATGA ATGGGCATTA
TGGGCAAATA ATTTCAATAT AAACTGCTTA GCCTCTAGTG CGAGTATCAG GTTTGACCGC
TCAGATTTGG CCGTTATCGC AGCTATGAAT AATGCTGGTG TAGCAATGGG TAGGGAGAGT
TTTATCAGTA ATCAAATTAA GAGAGGAGAG TTGATTAAAC CCTTTATTGA TAAAAAAATT
CTGTGTCCAC AGCGGTATTA TGTTGCTACG TTACCTAATA ATAAAAACAC AAAAATAGAA
TTGTTTATTG AATGGCTAAA AAATGAAGTA CAAAACGAAG GAGGTGAATC TATTGTGTGA
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| Protein sequence | MYTQDNVISN NKRLSSFQLS KMHTFEVAAR HCSFSLAAEE LSMTPSAISH RINALESELG
ILLFKRSHRK IELTKEGERI YIAVKSSFSS LNQEILEVKS NEISGELTVY SRPSFAQCWL
VPRIAGFQKQ YPAISLNILT GNENINFHGH GIDVAIYFDE KQPSKLYCQD IMTETIVPVC
SPEYAEEFDL IGKINNLSQC TLLHDNQAWG YDSNTDEWAL WANNFNINCL ASSASIRFDR
SDLAVIAAMN NAGVAMGRES FISNQIKRGE LIKPFIDKKI LCPQRYYVAT LPNNKNTKIE
LFIEWLKNEV QNEGGESIV
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