| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4647 |
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| Symbol | |
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| ID | 3520965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4907740 |
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| End bp | 4909020 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637287086 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_271294 |
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| Protein GI | 71280499 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGGTCA TTATTATCAT TGCCACCTTA GTATTAATGA TGGTTATTTT TAAAAACCCA
CCAACAAGTA ACCGTGGAAC GCCTTCAAAA GCACCGCAAA TGACAGTGGA AATCATCACA
CTTACACCTC AAACCTATCA AGTGATGGTA CAAAGTTTTG GTACCGTCAA ACCAAGAACT
CAAAGTGTGC TTTTCGCCCA AGTTTCAGGA CAAATTAATT ACGTAAGTAA ACAATTTAGA
GCGGGTGGTT TTTTCGAGCA AGGTGACATA TTAATCCAAC TTGATGATAG AGATCATCGC
GCTGAAGTTA ACATTGCTCA AGCAAGTCTA ATGTCAGCCA AACAAATTTT ACAAGAAGAA
GACGCACGGG TAAAACAAGC CAAAGCAGAC TGGAAAAGGC TTGGCAATGG TAAAGCGCCT
AATGCATTAG TATTACGTCA ACCACAATAT GAATCGGCAA AAGCGCAAGT ACTTTCTGCA
GAAGCTCAGC TGGATAAAGT AAAATTATCG CTAGAACGGA CAAGTATTGT TGCACCTTAC
GCCGGCCGTA TATTAAAGAA AAATGTTGAT ATTGGTCAGG TGATTTCAAG TAATACCCAG
TTAGCCGATA TTTTTGCTGT TGATTATGTC GAGATTCGCC TACCGATAAA AAACAAAGAC
TTACCGCTAA TGAAATTGCC TGAAGAGTAC CGCAATGCTC ATGAGCAGTC CGAAACTAGT
CGTTCTAACA GTAATAATAC TGATAACAAT AACTCTATGA TTAGTAATGT TGTTATTTCG
TCTGATCTGA TGGGCGATCA AGTATGGCAG GGAAAGATTG TTCGTACTGA AAGCGCCATT
GATGAAGTAT CGCAGCAACT CTATGTCGTG GCACAAATTA TTCGCCCATA CGACGGCGAG
TATAATCAAG GTGCGCAAAT AAAAATGGGC CAATATGTGA CTGCGGAAAT TACCGGGCGA
GAAGTCGACA ATGCCTTAGT AATACCGAGC AGTGCCATTT ATCAAGGCAG CTATGTGTAT
ATAGTTGAAG ACGGCTTATT GATGCGTAAA GAGATTAAAT TAGGATGGCA AAACGGTACT
GAGTCTATCG TCACGCAAGG ATTAATCGCG GGTGACCAGT TAGTACTAAC CTCATTAGGG
CAAGTCAGTT CAGGCACACC GGTTGCCATT GCAGGTCGAA CGCCTAGCAA AAAATCAAAA
AGCCCTAAAG AGCGCCGTCA AAAATCAGAG CAAGTAGCCA AAAAATCAAC CACAACACCT
GTTACTAAGG TGAATAACTA A
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| Protein sequence | MPVIIIIATL VLMMVIFKNP PTSNRGTPSK APQMTVEIIT LTPQTYQVMV QSFGTVKPRT
QSVLFAQVSG QINYVSKQFR AGGFFEQGDI LIQLDDRDHR AEVNIAQASL MSAKQILQEE
DARVKQAKAD WKRLGNGKAP NALVLRQPQY ESAKAQVLSA EAQLDKVKLS LERTSIVAPY
AGRILKKNVD IGQVISSNTQ LADIFAVDYV EIRLPIKNKD LPLMKLPEEY RNAHEQSETS
RSNSNNTDNN NSMISNVVIS SDLMGDQVWQ GKIVRTESAI DEVSQQLYVV AQIIRPYDGE
YNQGAQIKMG QYVTAEITGR EVDNALVIPS SAIYQGSYVY IVEDGLLMRK EIKLGWQNGT
ESIVTQGLIA GDQLVLTSLG QVSSGTPVAI AGRTPSKKSK SPKERRQKSE QVAKKSTTTP
VTKVNN
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