| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4566 |
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| Symbol | |
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| ID | 3521897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4820508 |
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| End bp | 4821386 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637287006 |
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| Product | putative MSHA biogenesis protein MshO |
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| Protein accession | YP_271214 |
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| Protein GI | 71281425 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.842341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTA GTTGTAATAA GTACTTTCTT AATAAAAATA GACTCGACAG ACGGCTAAAA
AATTCTGGCT TTACTTTACT TGAATTAATA ATAGTTATCA TAATCTTGGG GATAATGTCT
GTTGGTATTG CTGGTTTTAT AACATTAAGT ACACAAACTT ATTTAAATGT TACTGAGCGA
GATAAATTAC TTTCTAGTGC CCGTTTTGCT GTGGAGCGTT TGAATCGAGA AGTGAGAAAT
GCTGTACCCA ATAGTTTGAG AACATTCAAT AATAACTCAG CGCAATGTTT AGAATTCACA
CCCATCAAAG CAAGCACCAT GTATATAGAT ATTCCGGTTG TACCAGATGA TAAGTCAGGG
GAAATTGAAG TCGTTTCGTT TGTTGACTCT AGCGGTAACC CATTCGCCTG CACAGGATTT
TGTTTGGATT ACGTTGCTGT TTATCCGTTG CAATCATCAG ATATTTATGA TTTTAATGTC
AATTCAGGAA AAGGTAAAGT AACCGCTTTC AAAGCTTTTT CTAATTTACC TGGCAGTATA
TGGACTGTAC CTATTAGGCC GAACGCAGGG ATGATTTTTG ATGAACACTC ACCAACGAAA
AGGGCTTATG TTTTTGATGC TCCGGTTTCA TATTGTGTTA ATAACTCTGA ATTAAGACGT
TATTTTGGGC ATAGTTTTAC TGCGAACCAG TCATTAACAC CTACAGGGGG ATTTGTACTG
ATGGCTGAAA GTTTAACCTT CGATCAGAAT GATCTACCTT TTAAAGTTTT ACCGGCAACT
TTACAGAGGA ATGCAATGGT TCAAATTAAA TTGAATTTTG ATCGCGATGG TGAAGTCGTT
TCATTTAATA ATGATATTCA TATTAACAAT GTACCTTAA
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| Protein sequence | MKASCNKYFL NKNRLDRRLK NSGFTLLELI IVIIILGIMS VGIAGFITLS TQTYLNVTER
DKLLSSARFA VERLNREVRN AVPNSLRTFN NNSAQCLEFT PIKASTMYID IPVVPDDKSG
EIEVVSFVDS SGNPFACTGF CLDYVAVYPL QSSDIYDFNV NSGKGKVTAF KAFSNLPGSI
WTVPIRPNAG MIFDEHSPTK RAYVFDAPVS YCVNNSELRR YFGHSFTANQ SLTPTGGFVL
MAESLTFDQN DLPFKVLPAT LQRNAMVQIK LNFDRDGEVV SFNNDIHINN VP
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