| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4555 |
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| Symbol | |
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| ID | 3522062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4804818 |
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| End bp | 4808789 |
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| Gene Length | 3972 bp |
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| Protein Length | 1323 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286995 |
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| Product | putative protease |
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| Protein accession | YP_271203 |
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| Protein GI | 71281590 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTG TAAGTACTTC GAACCGTTGG CTAAACCGCC TTTATAAAAC AATTGCTATT
TTGTTAGTGT TGTTAGCGGT AATAATTAGT GCTTTTCGTT TGTTTTTACC TTATGTCCAT
AATTATAAAC TTCCCTTACA AAATTACTTA AACGAAATAT CTCAAACCAA TATTGTTATT
GGTACATTAA GTATGACCTG GCAACGGTCT GGACCCATCC TGATTATTGG TGATGTTCAA
GTGCTTGAGA CAGAAAGAGC CTCTGTATTT ATCGAGCAAC TTGAAATGCA AGTTGATTTT
TGGAGAACAC TCACAGAACA AAATTTAATT TCAAAAAATC TTCTTCTTTC TGGTGCAATA
GTCAATGTCT CGGAAAAATT ATGGATAGGT AAAGAAGATA AAGATAGCTC AGGTACAGTG
AAAAAAGATG ATGAAGCTGA TGATATTGAA GTTATTAGTG ACCTTTTTTT AAACCGTATC
AAGCGATTCT CTATACGTGA TAGTCAAGTC ACGGTGCGTA ATGAGTCAAT TACACGCAGT
ATAAGATTAA ACCAGCTACG TTGGTTAAAC ACAGGTGAGC GCCATCAAGC GGAGGGCAGT
GTGGTGCTCA ACGGCTTGAG TTCAAACAAC TTGCACTTGA AATTAGACCT ACAAGGTAAT
AAAGGCAGTG CACTTACTGG AAAAGTGTAC TTACAAGCAA ACCAGATTGA TATAACGCCT
TGGTTAGATG ATGTTTTAGT GCTCGAAGAC GACAAAACCA AAACGGATAT TAATTTCTCT
GCTTGGTTAC ACATTAATAA CAGTGATATT GACCGTTTAA AAATTGATTT TTCAGATAGC
AGCATGCATT GGCAGTTTGA GAATAAAAAA CAAACGTTAA CATTAGAGCA AGGGCAATTA
TTACTCGTCA AAGGTAAAGC CGATCGAAGC TTGATACTCT ACAGTACACC GTTAGCATTG
CGATTTAATG ATACGCCACC GCAACAATTT ACTGTTATGT TAGCGAAACA AGCAAATGAT
TTTTCATTAC ATCTATCTGA AATTGATGTT GCTATGCTGG CCCAACTAAC ACCTTTGATT
GTTGAAAAAC AAGAAACCCG AAATTTACTA TCTGAGATGA CCTTAACGGG AAAAATTGAA
GATCTTTATA TTCGTAATCA AAATAACACA CTGCAAATAG CGACAAACTT TTCTGGGTTT
AATAATAGCT ATAGTCACGG TATTCCTGGT CTAGAAAATG TCTCTGGCAA CCTCAGTTAT
GCCGATAATT ATTTATCAGT AGATTTTGAT GCAGAGCAAG GTAGGCTAGA TTTTGATAAA
TTGTTTGTTC AAGCTTTTCC TTATCAAAAA CTTTCAGGGC AACTAAATGC TGTATTTGAT
GATAAAGGTT GGACATTAAC CGTTGAAGAA TTAGATTTTC TGTCAAAAGA AATTAATTTA
TCAGCGCAAG TTAACGTTGA AGCACCGATT GATGGCGAAG TTAGGTTAGC GTTGTTAGCT
AATGTATCCA ATGGTAATGC TGGATTAGTG GGGCGTTACT TACCTTTACC AATCATGAGT
GAAAATTTAG TTAATTACTT AAATGCGGCT GTTGTTTCAG GTCGGGTTGA AGATGCGCAA
GTATTGATTA ATGGACCTAT TAGTCGTTTT CCGTTCACCG ATGGCAGCGG TATTTTTGTC
GTTGATGCCG AGTTGAGTAA ATCAGAGTTT AAATTTGTAG ATAACTGGCC TGCGATAACT
GACTTTGTTG CCAATTTAAA TTTTACTAAC AATTCTATGT TAATAACAGG GCGGGGTGGA
GAGCTAACTG GCCTTGACGT AAAAGGGGTT CGTGCAGGTA TTGCTGATTT AGCAAATGGT
CAAATTTTAA CAGTAGATGC TGAAATAAAG CCAACTCAAA CGCGTTATAT TGGTGATTTG
ATAAATCAAA GCCCATTTAA AGATAGTGTT GGTAGTGCGT TAGAACAGTT GCAAATTAGC
GGTGAGGTCA CTGGCGAGTT TCACCTAAAC CTACCACTTA ATAATAATGA ACAAGCATTG
GCAAGGGGCC TTATTAACTT TGATAATAAC AAAGTTGGCT TGCAAGCACC TCAGATGGAC
TTTACTGAAG TACAAGGACA GTTCATTTTT AGTAACGATA AAATTAGCAC TAAAGACTTA
CAACTGATGT GGCAAGGATT ACCCATTACC CTTGATATAT CTGGTATGGA TAAAGCTGAT
TACTATGATA CTGATATTAA CTTAGCTGCG TTATGGCAAG AGTCTACGTG GCTGTCCTTT
GTCCCTGAAA AATTACGTCG ATATACGCAA GGTGAGCTGC CGTGGCAAGG TTCATTATCG
CTACATCAAC ATCATCAGGG AGGTTTTTCT TACTCAGCAA ACTTTGACAC TGAATTAAAC
GAAACCCGAC TTTTATTACC AGCACCTTAT CAGCGTGACG CGAATCAAGA AAATGCTCTA
TCTGTAAAAA TTAATGGCGA TAAAGAACAG TCTAATGTTG TATTAAATTA CGGTGACAAA
ATGCATTTTT CTGGAGTGCT TGAACACCAA AATGTTGCGT TTACCCGTGC CAATTTAATG
TTAGGTGAAG GCTCTATGGC TTTACCTGGA GATGGTTTTC ATATCACCAC CAAATTAGCT
CAAGTGGATT TTTCGAAATG GCAGCCATTA ATTAGTAATA TTCTTGATAG CATTAATCAA
CCATCAACTG ATGCCGAGCA AGACAACTTA AAGAGTGTAG AGCAAGTAAA CTCAATTCCT
TTTTTAGCTA AGCCCAAAAG GATTAGAGGA TCTATTGGTC AGTTGAGTCT CTTGGGGCAG
GAGCTTAACA ATGTTTCTTT TAATTTATTA GATAAACCGC AATGGTGGTT ATTACAACTC
AATGCTAAAG AAACGCGTAG CCAAATAAAG ATTTATCCTG ATTGGTTAGT GCAAGGTTTG
GATATTAATG CTGAGTTTTT AACTTTTCCT CAGGAGCAAG AAAACACCGA TATAGAGGCA
ACTGTTGCAG TAATAAACCA ACAACCAGAT AGAGCAGAAA ATGATATTAT TTTTGCTGAA
ATCCCACCGT TAAAATTTCA TTGTGATCGT TGTGTCATTG GTTTAGTGAA TTTAGGGGAG
GTTGATGTAA ACATTAAACG TATTGATCAA CAGACGATTG AATTTAAAAA CTTTACTGCA
AAACGAAATA AAACATCATT AAATCTAGAC GGCAGTTGGC TTCATAATGA ACAAGCATCA
ATAACTACCT TAGTTGGTAA TCTGTCGGTG GATGATGTAG AAGCAGAATT AAAAGCAGCA
GGTTATGAAT CAATTATTAA AGACAGTGGC GCAAAAATTG ATGTAAACCT AAACTGGGAA
GGAGGTTTGC ATGATTTTAT GCTTAGCCAC TTAAACGGCA CGGTTAATGG ACGACTAGAT
GATGGCTATT TAGCGGATGT AAGTGACTCA GCACGTATTT TCTCAGTGTT GAGCTTACAA
TCTTTGGTAC GTAAGTTAAC ACTCGATTTT CGTGATATTT TTAGTGATGG TATGTTTTAT
AGTAATATCA AAGGAAACTA TCAATTAGAT CAGGGATTGT TAACTACCGA TAATACTAAA
ATGAATGGCA CCGCAGGTAA CTTGTTTATG ACAGGTAATA CCAACTTGGT CACCGGTGAG
CTTGATTACG AAATGTCTTA TAAACCTAAC CTAACTTCAA GCTTACCAGT GTTAGCTTGG
ATCGCTACCT CTTTGAATCC AGTAACTTTT CTTGCTGGGG TAGCTATCGA TCAAGTTGTT
AGGTCTCAAG TAGTCTCTGA ATTTAAGTTT GAGCTAACGG GCACGGTCGA TAATCCTGAC
TTCAAAGAAG TTGATCGTAA AAGTAAAAAT ATTAGTATCG AGGGCGCAGT ACCGACCGAA
GATGCTAAAC AAGATGAGTC AATTATAGAA ACACCCTCTA CATCTAAAAA GGATAAAGCA
ACCGATGGTT AA
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| Protein sequence | MSIVSTSNRW LNRLYKTIAI LLVLLAVIIS AFRLFLPYVH NYKLPLQNYL NEISQTNIVI
GTLSMTWQRS GPILIIGDVQ VLETERASVF IEQLEMQVDF WRTLTEQNLI SKNLLLSGAI
VNVSEKLWIG KEDKDSSGTV KKDDEADDIE VISDLFLNRI KRFSIRDSQV TVRNESITRS
IRLNQLRWLN TGERHQAEGS VVLNGLSSNN LHLKLDLQGN KGSALTGKVY LQANQIDITP
WLDDVLVLED DKTKTDINFS AWLHINNSDI DRLKIDFSDS SMHWQFENKK QTLTLEQGQL
LLVKGKADRS LILYSTPLAL RFNDTPPQQF TVMLAKQAND FSLHLSEIDV AMLAQLTPLI
VEKQETRNLL SEMTLTGKIE DLYIRNQNNT LQIATNFSGF NNSYSHGIPG LENVSGNLSY
ADNYLSVDFD AEQGRLDFDK LFVQAFPYQK LSGQLNAVFD DKGWTLTVEE LDFLSKEINL
SAQVNVEAPI DGEVRLALLA NVSNGNAGLV GRYLPLPIMS ENLVNYLNAA VVSGRVEDAQ
VLINGPISRF PFTDGSGIFV VDAELSKSEF KFVDNWPAIT DFVANLNFTN NSMLITGRGG
ELTGLDVKGV RAGIADLANG QILTVDAEIK PTQTRYIGDL INQSPFKDSV GSALEQLQIS
GEVTGEFHLN LPLNNNEQAL ARGLINFDNN KVGLQAPQMD FTEVQGQFIF SNDKISTKDL
QLMWQGLPIT LDISGMDKAD YYDTDINLAA LWQESTWLSF VPEKLRRYTQ GELPWQGSLS
LHQHHQGGFS YSANFDTELN ETRLLLPAPY QRDANQENAL SVKINGDKEQ SNVVLNYGDK
MHFSGVLEHQ NVAFTRANLM LGEGSMALPG DGFHITTKLA QVDFSKWQPL ISNILDSINQ
PSTDAEQDNL KSVEQVNSIP FLAKPKRIRG SIGQLSLLGQ ELNNVSFNLL DKPQWWLLQL
NAKETRSQIK IYPDWLVQGL DINAEFLTFP QEQENTDIEA TVAVINQQPD RAENDIIFAE
IPPLKFHCDR CVIGLVNLGE VDVNIKRIDQ QTIEFKNFTA KRNKTSLNLD GSWLHNEQAS
ITTLVGNLSV DDVEAELKAA GYESIIKDSG AKIDVNLNWE GGLHDFMLSH LNGTVNGRLD
DGYLADVSDS ARIFSVLSLQ SLVRKLTLDF RDIFSDGMFY SNIKGNYQLD QGLLTTDNTK
MNGTAGNLFM TGNTNLVTGE LDYEMSYKPN LTSSLPVLAW IATSLNPVTF LAGVAIDQVV
RSQVVSEFKF ELTGTVDNPD FKEVDRKSKN ISIEGAVPTE DAKQDESIIE TPSTSKKDKA
TDG
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