| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4506 |
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| Symbol | |
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| ID | 3520554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4753612 |
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| End bp | 4755777 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286946 |
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| Product | toxin secretion ATP-binding protein |
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| Protein accession | YP_271154 |
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| Protein GI | 71280091 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAA CTTCGCCTAA TCAACAACGA CTTAAATTTA CAGTATCAAA GACAACTCCT
TTGGTCCTCC AAGCTGAAAT TGCTGAGTGC GGTTTAGCTT CTATCGCCAT GATAGCTTCA
TTTTATGGTC ATCAATTAGA TTTAGTCGCC ATGCGCAAGC GCTTTTCTGC CAATTTAAAG
GGGATGAATC TCCAGCAGCT TATTGAGTTA GGTGATAGTT TAGGGTTAGC CTGTCGTGCT
TTACAGTGCT CTGTTGAAGA AGTACATAAA TTAGCGACAC CTTGCATTTT ACATTGGGAC
TTAAATCATT TTGTTGTGCT AACCCAAGTG TCAGGCAAGG GAAAGTCAGT TAAGTATTTG
ATCAATGATC CCGCTGTTGG CAAGCTCACA TTATCTACGG AAGAGTTTAG TAAGCACTTT
ACTGGCATAT GCTTAGAGCT TACACCTACA AATAAATTTG AAATAAAGCA AGAACAAAGC
CGCATGAAAT TCACCCAACT GTGGAGTTCA ATGTCGGGTT TAAAAGCTGG GCTTGTTAAA
TTGATTAGTT TATCGCTAGT GTTGCAAGTG TTTGCACTAA TGACCCCCTA TTATATGCAA
TGGGTAATCG ATGAAGTACT GATAAGTTTT GATAAACCCT TACTTACGGT ATTAGCTATT
GGTTTTGCCT TAATCGTTGT AATTTCTGTT GTCACAAATG CGGTGCGTAG TTGGTTGATA
TTACGCCTTT CTAGCTTGCT CAATATACAA ATGGGGGTGA ATCTGCTTAG ACATTTATTA
CGCTTGCCAA TGAACTATTT TGAGTCACGA CATATTGGTG ACATTGTTTC TCGTTTTGGT
TCTCTTGCTC AAATACGCGA GCGTATTACC ACTGGTTTTG TCGAAACGTT AGTCGATGGT
GTCATGGCTA TTACTGTCTT GATAATGATG GCGCTCTACT CTTTGAAGCT CACTGCGGTA
GTGCTTAGTG CAATAGTATT ATATACCATA ATACGCTTAA TGCTATATCG CCCACTGCAT
CAAGCTACCG AAGAATTGAT TCAAAGTTCT GCTAAGGAGC AGTCTAATTT CTTAGAAAAT
ATTCGTGGCA TGCAAGCTAT CAAGCTCTTT AGCAATGAGT CACAGCGTCA AGGAATATGG
CAAAATCGTT ATGCTGATGT CATTAATAGT GAAATCAGTT TAGGAAGGTT AAATATCAGT
TTTGACTCGT TCAACAAACT GTTGTTTGGT TTAGAAAATG TCTTAGTTAT TTATTTTGCT
GCCATCATGG TAATGGCTAA TAGTTTGTCC GTAGGTATGG TGCTGGCTTT TATCGCCTAT
AAAGGACAAT TAACAAATAG GTTTGCTAAT TTAATAGAAC AAATTATTCA ATTTAAAATG
ATGCGTTTAC ACCTTGACCG TATTGCCGAT ATTGCTTTGA CTGAACAAGA AGCTAACCGG
GAAGGTGAAG ATGTTTTTTC AAATAGTGAG GCTGATGAAC CAAAAGGACA ATTAACACTA
GAAAATATCT GCTTTAGTTA CAGCGACGAT CAAACACCAA TATTAAATAA TATTAATTTG
TCAGTAAAAG CAGGGGACTC GATTGTTATC ACTGGTCCAT CAGGATCAGG AAAAACGACT
CTAATGAAAA TTATGCTGGG TTTATTGCAA CCCACTTCAG GTAAAGTAAT GCTTGATGGT
AAAGATATTA ATCATGTTGG TTTAAAAAAT TACCGTAAGA AAATAGCGGC AGTTATGCAA
GGTGATACGC TACTGGCAGG TTCTATTGCG GATAATATCA GTTTTTTTGA TCCCCAACCA
AATTACCTAA AAATAGAAAA GTGCGCTCAC TTATCTGCAA TTCATGACGA TGTTAACAAG
ATGACCATGG GTTATAATTC ACTTGTAGGT GATATGGGGT CTAATTTATC TGGTGGCCAA
ATTCAGCGGT TACTACTTGC TCGTGCCCTA TACCAATCTC CTTGCGTGTT ATTTATGGAT
GAAGCAACAA GTCACTTAGA TAAAGAAAAT GAAGCGAAAA TTAGTGAACA GATCCAACAT
TTGCCAATTA CGCGGATCAT GATTGCTCAC CGACAAGAAA CAATCAATAT GGCTGAGCAA
GTTTACATAT TGAAGGATGG TGTATTAATG GACTTAGATG AAAGTTATTC GGAAGCTGTA
ATCTAG
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| Protein sequence | MIKTSPNQQR LKFTVSKTTP LVLQAEIAEC GLASIAMIAS FYGHQLDLVA MRKRFSANLK
GMNLQQLIEL GDSLGLACRA LQCSVEEVHK LATPCILHWD LNHFVVLTQV SGKGKSVKYL
INDPAVGKLT LSTEEFSKHF TGICLELTPT NKFEIKQEQS RMKFTQLWSS MSGLKAGLVK
LISLSLVLQV FALMTPYYMQ WVIDEVLISF DKPLLTVLAI GFALIVVISV VTNAVRSWLI
LRLSSLLNIQ MGVNLLRHLL RLPMNYFESR HIGDIVSRFG SLAQIRERIT TGFVETLVDG
VMAITVLIMM ALYSLKLTAV VLSAIVLYTI IRLMLYRPLH QATEELIQSS AKEQSNFLEN
IRGMQAIKLF SNESQRQGIW QNRYADVINS EISLGRLNIS FDSFNKLLFG LENVLVIYFA
AIMVMANSLS VGMVLAFIAY KGQLTNRFAN LIEQIIQFKM MRLHLDRIAD IALTEQEANR
EGEDVFSNSE ADEPKGQLTL ENICFSYSDD QTPILNNINL SVKAGDSIVI TGPSGSGKTT
LMKIMLGLLQ PTSGKVMLDG KDINHVGLKN YRKKIAAVMQ GDTLLAGSIA DNISFFDPQP
NYLKIEKCAH LSAIHDDVNK MTMGYNSLVG DMGSNLSGGQ IQRLLLARAL YQSPCVLFMD
EATSHLDKEN EAKISEQIQH LPITRIMIAH RQETINMAEQ VYILKDGVLM DLDESYSEAV
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