| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4492 |
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| Symbol | |
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| ID | 3519506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4736062 |
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| End bp | 4737309 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286932 |
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| Product | putative pyridoxal-dependent decarboxylase |
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| Protein accession | YP_271140 |
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| Protein GI | 71278023 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.799972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAT CCACTTGGTT TGACACCAGC ATTGAAAATG CCTTAGTTAC ACATGAATCA
CCAGAAGATG AACAAGGCTA TTTTGTTTAT CAACTTGATG CACTTAAAGC ACATTTAGCC
GCTTTACAGC AGCAAGATGT CATTAAATTA TGGTTTGCCG TTAAAGCGAA TCCACTATCC
AAAATAATTC AAACATTAGA TAGTGAAGGC TTTAACTTTG ATGTTGCTAG TAGCGGTGAG
TTAGCTCAAG TTTTAGCGCA GGGAATAGAC CCTAGTCGGA TCTTAAATAC TGGACCAGCT
AAATCAAAAA AACAACTGAC TGCATTTATT AAGCAGGGCG TTAATACTTT TGTGGTTGAG
AGTCTAAATC AACTGAACTG GTTAAATGAA GCAGTACTTG AGCAGGAACA ATCACTCAAG
AGTGTTGAAA AACCGAAAGT ACTACTGAGA GTTCAGCTGC AATGGCATGA AGGCGAGAAA
AACCCACTGG GTGGAAATAG CTTAACGCCC TTTGGTCTAT CAGTGTCTGA ATGGCAGAAT
ATTCATGTAG ATAGCTATCC AGCGTTGGAT CTTTGTGGCT TGCATATTTT CCAATGGGGT
AACATGCTCA GTAATGAAAA AATGTTTTCA TTATGGTCCC AAATGATAAC TCCCTTGACT
GATTTAGCTA GTAGCATTGG TATGACACTT GAAGTACTCG ATTTAGGTGG TGGTTTAGGT
ATTGATTATT TAGGCGAGGG ACAAGCTTTG TCTTGGTCTC AAGTTATCGA AGACTTGGCC
ATTATCAAAG CAAAAGCTGG TGTCAAAGAA TTATGGCTTG AGTTGGGACG TTTTGCGGTT
GCAGAGTATG GCTATTATGT CGTGCCTGTT GTTGATAGAA AAATGAATTA CAACCAAGAT
CAGTTAGTGT TGGCGGCGGG AATAAATCAT TTATTGCGTC CTGCTATTAC TGATCAACCT
TTTCCGGTAC AGATACTACG AGAAGGGTTT GTAGCTGAAG ACGACTCTAT GCAAGCTTTT
GATTTGCATG GCCCTTTATG CACCAGTATG GATAAATTAG GGCATTTACA GTTACCTAAA
GACACGGCTG TTGGTGAACA ACTCGTGTTT GGTTATTGCG GTGCTTATGG CTTTACTGAA
AGCATGCCGT TTTTCTTATG TCATGAATTA GCGGCTGAAT ATGTTTACCA AAATGGTACG
CTAACTCAAA TCAGAGCAGC TCTGCCTGCT TCATCTTATT TGGCTTAG
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| Protein sequence | MTKSTWFDTS IENALVTHES PEDEQGYFVY QLDALKAHLA ALQQQDVIKL WFAVKANPLS
KIIQTLDSEG FNFDVASSGE LAQVLAQGID PSRILNTGPA KSKKQLTAFI KQGVNTFVVE
SLNQLNWLNE AVLEQEQSLK SVEKPKVLLR VQLQWHEGEK NPLGGNSLTP FGLSVSEWQN
IHVDSYPALD LCGLHIFQWG NMLSNEKMFS LWSQMITPLT DLASSIGMTL EVLDLGGGLG
IDYLGEGQAL SWSQVIEDLA IIKAKAGVKE LWLELGRFAV AEYGYYVVPV VDRKMNYNQD
QLVLAAGINH LLRPAITDQP FPVQILREGF VAEDDSMQAF DLHGPLCTSM DKLGHLQLPK
DTAVGEQLVF GYCGAYGFTE SMPFFLCHEL AAEYVYQNGT LTQIRAALPA SSYLA
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