| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4415 |
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| Symbol | |
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| ID | 3523341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4652069 |
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| End bp | 4653307 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286856 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_271064 |
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| Protein GI | 71277837 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG CATTAACTAA AAAACAACCT TGGAAAAAAT GGGTCGCTAT CGCCAGCTTT
ACCCTAGTGC TAAGTTACGC CGGTTATAGC GTCAGTGGGA AGGCAACAAA ATCTGTCCAA
TTAAAAGATT TAAGCTTTCA AACAGTAGTT CAAGGTGATT TAGATATTTA TGCTAATGCC
TATGGTGAAT TTGCTTCAGC AAAAGAACGT TTATTAACGG CGCCTGCATT AGGTAAGGTC
TCTGAAATTT TAGTTCGTCC TGGCACTAAA GTAACACCTG ACACTATAAT TTTGCATTTA
TCAAACCCTA AATTAGTACA AGAAGTAAAT GCTGCTAATG GCCAACTTGC TCAACAGTTA
GCCCAAAGAG AAGCATTCAA ATATGAACAA CAAAGTGAAC GTTTAAACTA TCAAGGTCGC
ATTGCTGACA TAGAAGCCGA GATTGAAAAA GCTGAGCTTG AGCTCTCGGT GAACATGAAT
CTGATGGACT TAGGTGTTTC TTCCAAAATA GAATTACAAC GCGCTAAATT GGCCGTGAAA
CAGGAAAATA AAAGGCTTGG TTTCGAAAAG AAGAAATATA AGCAATTTAT TGAAATGCAA
AGCCACCAAC TCACACAGCG TGATATCACT ATAAAGCAGC AGCATGCACA AGTTAACTTA
CTTGAACAAC AGCTTGATGA TATGAAGGTG AAAGCAGGTA TTAATGGTTC ACTACAAACC
TTAGAAGTTG AACTAGGTCA GAGCGTTCAA TTAGGTCAAT CACTAGCTAA AGTAGGTAGT
GATGAAGTAT TGATTGCTCG TTTACGCTTA CCACAAAACC AAGCAGACCA AATAGATATC
AATGCTCTAG TCTTAATCGA TACCCAAAAG GGCATTATCA AAGGTCACAT CACCCGCATC
GAAAGTGTTG TTAACAATGG GTCAGTGCTT GCTGAGGCTG TCATTGATGA AGACTTAACT
TCTAATGCAC GTCCTGCGTT ATCAATATCA GCACAAGTAT TTGTCAGGCA TCAACAAGAA
ATCAGCTACA TAGAACAAGT ACCAGGGTTT CGCCCACGCA GTAAACAAAG CCTTTTTGTT
CGCGACACTA ACGACTCATT AGTGCAGAGA GATGTCACCT TTGGCGAGTT ATCAAAAAAT
AAATTAGTGA TCACTTCAGG ATTGAAACCT GGTGAGCAAT TAGTGAGTAG CGATACGCAA
AAATACACTA AATATCCGCA ACTTTTAATT ATTGAATAA
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| Protein sequence | MKIALTKKQP WKKWVAIASF TLVLSYAGYS VSGKATKSVQ LKDLSFQTVV QGDLDIYANA
YGEFASAKER LLTAPALGKV SEILVRPGTK VTPDTIILHL SNPKLVQEVN AANGQLAQQL
AQREAFKYEQ QSERLNYQGR IADIEAEIEK AELELSVNMN LMDLGVSSKI ELQRAKLAVK
QENKRLGFEK KKYKQFIEMQ SHQLTQRDIT IKQQHAQVNL LEQQLDDMKV KAGINGSLQT
LEVELGQSVQ LGQSLAKVGS DEVLIARLRL PQNQADQIDI NALVLIDTQK GIIKGHITRI
ESVVNNGSVL AEAVIDEDLT SNARPALSIS AQVFVRHQQE ISYIEQVPGF RPRSKQSLFV
RDTNDSLVQR DVTFGELSKN KLVITSGLKP GEQLVSSDTQ KYTKYPQLLI IE
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