| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4406 |
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| Symbol | |
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| ID | 3520464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4639922 |
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| End bp | 4641346 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286847 |
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| Product | sodium-dependent symporter family protein |
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| Protein accession | YP_271055 |
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| Protein GI | 71280001 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.926832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCTT CTAGAGAGCA TTTTAGCTCA CGAATTGGCT TCATTTTAGC CGCTGCAGGC
TCTGCAGTAG GTATAGGTAA TTTAGTTGGT TTTCCAGTTA ACGCCGCTAA AAATGGTGGC
GGTGCATTTT TGTTAATGTA CGCATTATTT GTTTTTCTTA TTTGTTTGCC TGTGATGATT
GCTGAAATGG CTGTTGGACG TAATACGGCT AAAGAGCCTG TTGGCGCATT TAAAACATTG
AGTAAAGGCA GTAAGTTATG GGGAGCCGCT GGCTTTTTAG GGGTATTAAC TCCCTTTATG
ATTGCCGTTT TTTATATGGT GATCACTGTT TGGATTTTTG GCTATATTGC CTTAACGGTA
ACAGGTCATT TAGACTATTT AGCAAGTGAT GTTGGTTTTG GCGAGTTTAT TAACAGCCCG
TACTTATATA TTGCTTTAAT AGCTGTTGCC GGTATTGTCA GTTTTATTTT GGCGGCCGGG
GTCAAAGACG GAATTGAAAA AGCAGCTAAA ATATTAATGC CAGCATTGCT AACTATGCTT
ATTTTAATGG TTGTATTTGT ATTGTCTCTT GATAATGCTA TGGCAGGGGT TACTTTTTTC
TTAGTCCCAG ACATTAATAA AATAACGCCA AGTGTAGTCA ACGGTGCTTT GTCGCAAGCT
TTTTTCTCAC TTTCTTTGGG TATGGGGATA TTACTAACCT ATGGCTCATA TATAAATAAA
CAAACTAATA TTCCTAATTC CGCTAAATTA GTGGCGATTA CGGATACGAG TGTGGCATTT
ATTGCTGGTT TGATGATTCT TCCTGCAGTA TTTTCATTTA ACCCTGAAGT TAATCCAAGT
GAGTTAAGTG ATAGCTCAGT GTCATTGATT TTTACCTTTC TACCTAAAAT ATTTTTAGCA
CTACAAACCT CATTGGGTTA TGTGGGTGCT AGTGCTGTGG CTGCATTCTT CTTCTTATTA
GTCTTCTTTG CCGCAATTAC TTCGTTAGTT TCCATCATTG AAGTACCGGT TTCATATTTA
GTCACTGAGA AAAAGCACAG TCGTAAAAAA GCATTAGGTT ACTTAACGCT TACTGCTGGT
GTGCTAACTT TATTTGCCAC AGCATCGTTT GGCATGGTGC CATTTTTTAC CGAGTTTACT
TCGTACGCTG GCGGTACTAA GTCCTTATTC GATGTTATTT ATGATGTTTT TTACGATACA
ATTTTACCGC TTAATGGTTT CTTACTGTGT ATTTTTGTGA GTTACCGTTG GAAGAAAAAG
CAACTATCTG AAGAACTAAG TATCGGTAAT GAAAACTACA AAGGTTCATG GGTAGAAAAA
TATATTAACT TTTCATTGGG TACTTTTATC CCTGTTATCG TGCTGCTTAT TTTTATTAAT
ACTGTGGCAA CAAAGTTTTT TGCAGCTAAC CTTTTTGGTT TCTAG
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| Protein sequence | MSASREHFSS RIGFILAAAG SAVGIGNLVG FPVNAAKNGG GAFLLMYALF VFLICLPVMI
AEMAVGRNTA KEPVGAFKTL SKGSKLWGAA GFLGVLTPFM IAVFYMVITV WIFGYIALTV
TGHLDYLASD VGFGEFINSP YLYIALIAVA GIVSFILAAG VKDGIEKAAK ILMPALLTML
ILMVVFVLSL DNAMAGVTFF LVPDINKITP SVVNGALSQA FFSLSLGMGI LLTYGSYINK
QTNIPNSAKL VAITDTSVAF IAGLMILPAV FSFNPEVNPS ELSDSSVSLI FTFLPKIFLA
LQTSLGYVGA SAVAAFFFLL VFFAAITSLV SIIEVPVSYL VTEKKHSRKK ALGYLTLTAG
VLTLFATASF GMVPFFTEFT SYAGGTKSLF DVIYDVFYDT ILPLNGFLLC IFVSYRWKKK
QLSEELSIGN ENYKGSWVEK YINFSLGTFI PVIVLLIFIN TVATKFFAAN LFGF
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