| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4383 |
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| Symbol | |
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| ID | 3519006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4618038 |
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| End bp | 4620140 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286824 |
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| Product | TonB domain/peptidase M56 domain-containing protein |
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| Protein accession | YP_271032 |
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| Protein GI | 71278399 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAC AATTATTTAA CAGCCCTTTT TTATATAGCT TATCGCTAAC CTTAGTGCAT
TTTTTATGGC AAGGTTTACT GGTGGCGCTT ATCTTAAAGT CCTTGTTATA TATAATTGAT
AAGAATAAAT CAAAACTGCG TTACACACTC GCTACGTTTG CAATGTTATC AAATGCAATA
CTTGCGGTAC TGACCTTTAC CATGGTTTAC CCTGACACAA GCTCAGGCAT TAATAGTTAT
CTCAGTCCCA TTCCCCTTAC AAGTTTAGTA AATGAGTTAA CCCAACAAAA TGCCTTGTTT
ACTTATCAAG AATTGTTGCC CTCAATTTTA GCCTATTCAT TACCTTACCT GTCATTACTT
TGGCTAGCTA CCATTGCAAT TCTTTCTAGC AAGCTACTCA TTGAAATTCG TAATGTAAAT
AACTTACCTC TGCATTCGAG CATTTCCCCC TCTTTGGCTT TATCAGCCCG CTTTGAAGAA
TTGGCCAAAC AAATAAAGTT AGCTAAAACA CCCAGATTAC TTATTTCATT GAAAGCTGAA
GTACCTATGG CAATAGGGTG GTTAAAGCCT GTGGTATTGC TACCCGCTAG TATGGTGACC
GGACTAAACG CGGCTCAACT TGAAATGCTT ATTTTGCACG AACTTGCACA TATTCGCCGT
CATGATTATT TAGTTAATTT TTTACAAACA CTGATCGAAC TACTGTTTTT CTTCCACCCA
AGTGTGCATT GGATCGGCAA GCAAATGCGT AATGAACGTG AATATTGTAG CGATGATATT
GCTGTTCAAC ACTGCGGTGA TGCCATAGCT TACGCACACA CCCTAACGGA TACCGCCTCT
TTATGTGCTA AAAATCACTT CCATACGATT CCGACCATGG CAATGGCAGC ATCCGGCGGT
GATTTAAAAG AACGAGTGCT TCGCCTTGTT GATCATCATT GTGCCCCAAC AAATAACACC
AGCAAGTGGT TAGCGGCAGT AAGCCTACTT TTAGCGCTAG CATTATTGAG CATGAATCAA
TTATTGACCA TGCCTTTTGC TCAACAGCTA AACAACAAAT TCCCATGGCA AGAAAAAAAC
AGTATTAACA GTAATATTGC GAGCACAACG ATTGCAGCAA TGAATTTTAA TAAAGACAAC
ACAAGTAATC GGAATACAAC ACTGAACAAT GATTCGATTG CTCAGCAACT ACTCCATCGC
GAAGAGACGT TACCTGATGC TTCTGTTGTA GAGTTAGAGA ATAATCAGAA TGCATTTGCT
GTGAAAAGTA AAAACGAATC AGAGTTAACC ACTGCTATTG TAGAGCCTTT GGCTATCAGC
AATTATCAAG ATACCATCAA AGCAAAGGAA ACGGCTCAGA TTAATCGAAG TGCAACAATT
AGCAGTACAA AACAGATAAC TGCGGGTGAT AACGAGGTAC TAACAGCCCT AAGGGTGAAA
GTTCAGCGTG ATAGTAGAAC AACACCTCAA CTGACTTCAG CAAAATCAGA CCTAAATGTA
GCAAAAAATA GTTTATCATC AACAACTAAT TTGCAGCCGT TAGCTATTGA AAAATCACAA
CCTCAATTAA TATTATCATC GATTTCAGCA GACAAGTTTA CTGCGCAGCC AGCTATCATT
AATTCATCTC AAGAGGGTAA TATGCAATTA TCCCTCTTAA ATGATAAAGC GTTAAATAGC
AAAAAAGACT CGTATCACAA ATTGGCTTAT AACCAAGAAG TTAACAAACT AGCCGAACAA
AGTGAATTAT ATAAAGCCTC AAACACAGTT AAAGTTGGAA AGGCGAGCGA AATTGAACCA
TCAAAGCAAG AAGTATTGCA GATGCCAACC TCATTTGAGG CAAAATTACT TAACTCTATT
AATCCAGTAT ATCCAAGCCT TGCAAAGCGC CGTGGCCTTG AGATGGAAGT ACAAGTAGAT
TTCATTATAG ATCGTGATGG TAAAGTTAAA GATATTAGTT TCGCGCAACA AAGTAAGCTT
ATTTATTTCA AATCAGCTAT CCGCTCAGCT ATTCGTAAAT GGCGATTTAG TCCTGCTACG
ATAAACAACC GAAAGGTTGA AAGTAAGATG ACAAAGATAT TCTCTTTTAG CTTGCATGCC
TAG
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| Protein sequence | MFEQLFNSPF LYSLSLTLVH FLWQGLLVAL ILKSLLYIID KNKSKLRYTL ATFAMLSNAI
LAVLTFTMVY PDTSSGINSY LSPIPLTSLV NELTQQNALF TYQELLPSIL AYSLPYLSLL
WLATIAILSS KLLIEIRNVN NLPLHSSISP SLALSARFEE LAKQIKLAKT PRLLISLKAE
VPMAIGWLKP VVLLPASMVT GLNAAQLEML ILHELAHIRR HDYLVNFLQT LIELLFFFHP
SVHWIGKQMR NEREYCSDDI AVQHCGDAIA YAHTLTDTAS LCAKNHFHTI PTMAMAASGG
DLKERVLRLV DHHCAPTNNT SKWLAAVSLL LALALLSMNQ LLTMPFAQQL NNKFPWQEKN
SINSNIASTT IAAMNFNKDN TSNRNTTLNN DSIAQQLLHR EETLPDASVV ELENNQNAFA
VKSKNESELT TAIVEPLAIS NYQDTIKAKE TAQINRSATI SSTKQITAGD NEVLTALRVK
VQRDSRTTPQ LTSAKSDLNV AKNSLSSTTN LQPLAIEKSQ PQLILSSISA DKFTAQPAII
NSSQEGNMQL SLLNDKALNS KKDSYHKLAY NQEVNKLAEQ SELYKASNTV KVGKASEIEP
SKQEVLQMPT SFEAKLLNSI NPVYPSLAKR RGLEMEVQVD FIIDRDGKVK DISFAQQSKL
IYFKSAIRSA IRKWRFSPAT INNRKVESKM TKIFSFSLHA
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