Gene CPS_4374 details

Gene Information

• Locus tag: CPS_4374
• ID: 3520127
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4607758
• End bp: 4608255
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637286815
• Product: ribonuclease activity regulator protein RraA
• Protein accession: YP_271023
• Protein GI: 71279667
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0684] Demethylmenaquinone methyltransferase
• TIGRFAM ID: [TIGR01935] RraA famliy; [TIGR02998] regulator of ribonuclease activity A

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATATA ACACTTCTGA ATTATGTGAC TTTTATGCCG ATTTGATTGA TGTTGTTGAT 
CCCATTTTTT GTAATTACGG TGGTCGCAGT TCATTTGCTG GCAAAGTTGT TACGTTAAAG 
TGTTTTGAGC ATCTAGGTTT GATCAATGAA CTCGTTGCTA CATATGGCAC AGGGAAAGTA 
TTGGTCATTG ATGGTGGAGG ATCCACGAGA CGCGCTCTGA TTGATTTAGG TATCGCGCAA 
TGTGCTGCTA ACAATGGTTG GGAAGGAATT GTTTGTTATG GCAGTGTACG TGATGTAGAT 
GCTTTAGATG GAGTAGATAT TGGTATACAG GCGCTCGGAG CAATTCCAGT TGGGGCAAGT 
GAGCAAAATA TTGGAGAAAC TGATATGGCG ATTAATTTTG CCGGAGTGAC CTTATTACCT 
GATGATTATA TCTACGCTGA TAATACCGGT ATTATACTGT CGCCTGAAGC ACTCGAGATT 
GCATCAAGTA TGGCTTAG 

 

Protein sequence

MQYNTSELCD FYADLIDVVD PIFCNYGGRS SFAGKVVTLK CFEHLGLINE LVATYGTGKV 
LVIDGGGSTR RALIDLGIAQ CAANNGWEGI VCYGSVRDVD ALDGVDIGIQ ALGAIPVGAS 
EQNIGETDMA INFAGVTLLP DDYIYADNTG IILSPEALEI ASSMA