Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4343 |
Symbol | |
ID | 3523007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4575901 |
End bp | 4576743 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286784 |
Product | thioredoxin domain-containing protein |
Protein accession | YP_270992 |
Protein GI | 71282532 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGCCA TTACTCTAGA TAATTTTCAA CAAGTCGTTG TTGAAGAATC AAAAAACAAA TTAGTACTCG TTAGCTTTTG GGCTGAACAA GTACCTGAGA GTGTTGAACT AAGAAATAAA CTAGCGGCTA AGCTATCAAA CCTAAGCGAA CATATCACTT TAGCGACTGT TGATTGTCAA AGCCAAGGGC AAATCGCTGA GCAATTTGGT ATTAAAGGCT TACCTACGGC TATTTTATTA AAAGATGCCC AGCCTCTAGA TGGAATTTCT GGACCACAAG ATGATGCAAG CATTGCTACG TTTTTAGATA GTCACTTACC AAAACCTGAA GATATACTGC TTGCACAAGC AAAAGCTGCA CTTGGGGATA ATCTATTAGT TGAAGCTGAA AATATCATCA TGCAGGCCTA TCAAATTGAT AATAATCGCG CTGATATTAA GGTAATATTA ATTGATCTTT ACTTACAAAC GGGAAAGACC AGTGAAGCAA AGGCATTATT AGACACCATA ATGATGGTTG ACCAAGATAG TCAATATCAC GCTTTAATAG CCAAGCTAGA ATTAGCTGAG CAGGCGGAAA ACTCTCCAGA AATAAAAGCA TTAGAAGCAC AATTAGAAGC AACGCCTGAT GATATCAATG TCAGTCAACA ACTTGCAGCT CAATACAGCC AAGTTAATCG TCAAGAAGAT GCACTCACCA TATTATTTCG TTTAGTACAA GCAGGTGATG AAAGTACAAA AGAGAGAAGC AAAGAGCTAT TTCTTGATGT ATTAAAAGCC TTACCTGATG GCGATCCGCT GGCAGCAAAG TTTCGTAGAA AGCTATACAC CTTAATGTAT TAA
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Protein sequence | MIAITLDNFQ QVVVEESKNK LVLVSFWAEQ VPESVELRNK LAAKLSNLSE HITLATVDCQ SQGQIAEQFG IKGLPTAILL KDAQPLDGIS GPQDDASIAT FLDSHLPKPE DILLAQAKAA LGDNLLVEAE NIIMQAYQID NNRADIKVIL IDLYLQTGKT SEAKALLDTI MMVDQDSQYH ALIAKLELAE QAENSPEIKA LEAQLEATPD DINVSQQLAA QYSQVNRQED ALTILFRLVQ AGDESTKERS KELFLDVLKA LPDGDPLAAK FRRKLYTLMY
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