| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4327 |
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| Symbol | |
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| ID | 3521341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4554765 |
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| End bp | 4557464 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286768 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_270977 |
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| Protein GI | 71280872 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAT TAATTCTGTT GCGACAACTT GCCGAAAATC AACAATACCC TAGTTTGCTC
GAATTAGCGC AATCACTTTG GTATGACAGC GGCAACCCAG CAGTATTGCC CTTGTTAGCT
ACAGCTAACG CCCATATGGG ATTAAAAGAA AATACCCAAG CCTTATACCA ACAATCGCTT
AAACATTTTG ACGTGCTTGA TGTCGATGCC CGCTGTGATT TGGCTGTGGT GTTAATTGTG
ATGCAGCGTA TAGATGACGC CATTAAAATG TTAAGTGATA TCTTGATGGA ACAAGGTAAC
CATGCATTAG CTCTGGCACG CTTAGCATAC TGTTATTTAG CTTCTGGTCG CTTAGCTGAA
GCACAACACT TTTTTGAAAA ATCACTAATA ATCACTCCTG AGCGCTTCAT CGTACACCGC
AATTTAGTGG CCGTATATAT TGCACAAAAT GAGCTCAACC AGGCACAAAA ACAGCTCGAT
AGCGCAACAG AAGTGTTAGT TAATTATCAT AAGGTCGGTG ATCCGCTTTA CCAGCAATAT
TGGTTTCAAC TGAACACTAC GCAATTACAA CTATGGGTAG TACAAGGTTT ATTTTGCCCT
GCTGAAGAAT GGCTTACTCA GTTAAGTGTG CGACAACAAG CGGGTGACTA TGATGAAGCC
GTATTAGTAC AATACGTTAA AAGCTATAGC CAAGTGTTAG CGGAAAAAAA TTTTCATCAA
CAAGCAACGA ATATTCTACG TGAATACTTA AAGCAGTATA ACAATAACGT AGAGCTATGC
ATGGCACTTG CTGAACTAGC GCAGGTACAA GGGCACTTTA TGCAGGCGAT TAGTTTACTG
CAAAAAGCGT TAAAAAAGGA TGAAGGAAAT AGTGACCTTT GGGTGCAGTT ATCAACAGCC
TGCTTGCACC GTTTTGATAA AAAGGCACGC AAAGCGGCAG TACGGGCTGT CAGTTTGGCA
GAAGCGCTAG AGATTACAGA TGAACAATCC TTAGTGTTGA TTAAAATGAA ACAAGCACAG
GCAAACAATG CTTTAGCTGA AGTGGAATGC CAAGAGCAAA ATTTTGAAGT TTCAGAGAAG
CTCTATCGTG ATATTTTGGC TGAGCACAGC CATTTTTTAC CGGCACTGCA AGGATTAGGT
CAGCAACAAA TGCAGCAGGG GAATATTGAT GAAGCAGTAG CCTTATTTGA ACGTATTAAA
GATATTGACC TACTGAAAGG GTGTTCGGCA CTAATTAATG TCCGGCGTTT TCCTGATGAT
GTAGAAGCCT TAGATAAAAT GGCTATCGCG GCCAATAAAC CTAGCATGGA AGGCTCGTTG
CGCGCCGGTA TTTTGTTCCA ATTAGCAGCC GCGTGGGAAA AAAAGAAGGA CTATAATAAA
GCCTTTAGAT TTGCTGAACA GGCTAATAAC GCCAGTAAAA AGTTTTTATC ATACAATGCT
CAAAAACACC GCGAAGACTG TGCAAGATTA CGTGCTTGTT TTAACAAAAC CTTGTATCAG
CATCGTCCTA ACTACGGTAT TGAATCAACA ATACCGGTAT ATGTGTTAGG CATGCCGCGC
TCGGGTACTA CTTTGGTTGA ACAAATATTA TCCGGGCACA GTGATATTTT TGGTGCCGGT
GAGTTAGGTG TTATTCCGCA AGTTATACAA GGGATAAATC GCTGGGAACG CCACACTGGC
TCTGGTCGAC AATACCCCGA TTGTATTGAC GATTTTAATG CCGATACCAT CGCAGGTATT
GCCAATAATA TGTTAAAAGA ATTACAAGAA CTCGCCGCTG AAACTAAGCC AGAATCAAAA
TACGTGGTGG ATAAAATGCC GCATAATTTT GAAAATATTG GTTTAATTAA ATTTTTATTT
CCCAACGCTA AAATCATTTC AGTACGTCGC GACCCACGCG ACATAGCTAT GTCGAATTAT
TTTACTGATT ATCAAGCTAA GCATGGCGGT ATGGGCTTTG CCTATGATCT AGAGCATATT
GGAGAACAAT TAGCCGATCA TAATCTGTTA ATGCATCATT GGCAGCAAAC CTTTCCTGAT
GAAATTCTAG AAATTAATTA TGAAGATGTC GTTGACGACA TAGAAGGCTG CGCCCGTAAA
ATGTTGAGTT ATATTGGCGT AAACTGGCAA CCCAAAGTAC TTAAATTTAA TGAGTTAGTA
CGTACAGTGA AAACAGCCAG TGTTTGGCAG GTACGACAAC CTATTTATAA AACATCAAAA
GGTAAGTGGC TGCGTTATCA AACTCGGTTA ACACCATTAA TCAAAGGTAC TAATGCAAAA
ATAGTATCAC ACCCTATAAC TGATTTGCTC ACCTTGCCTG AGCCCGGTTT TTTAACTGAC
GGTGTCGCAC TATACAAAGA GGGTAAGCTT GATGATGCTG AAATGTGCTT TAAAAAGATG
CTACATCATA ACCCTGGTCA TGCAGCGTGT CATTATATGA TCGGGCTGGT TTATTTGACT
AAAAACCATG CTCAAGATGG TATTAGGCAC TTTGAAAAAG CAGTTGCTAG CTGTCCTTGG
CAAAAAGAAT GGCGACAAAA CTTATTGAAA GCATACGAGC AAGAAGGTGA AACCAATAAA
ATAGCGGCGT TTAAGAAAGG TAACCAACGA ACGACTGCCA ATGATGCCAA TAATGCCGTT
ACCTATGATG AACATTTCAC CAGTGATGCT TTTACGACGA AAACGACAGT TTCTCAATAA
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| Protein sequence | MNELILLRQL AENQQYPSLL ELAQSLWYDS GNPAVLPLLA TANAHMGLKE NTQALYQQSL
KHFDVLDVDA RCDLAVVLIV MQRIDDAIKM LSDILMEQGN HALALARLAY CYLASGRLAE
AQHFFEKSLI ITPERFIVHR NLVAVYIAQN ELNQAQKQLD SATEVLVNYH KVGDPLYQQY
WFQLNTTQLQ LWVVQGLFCP AEEWLTQLSV RQQAGDYDEA VLVQYVKSYS QVLAEKNFHQ
QATNILREYL KQYNNNVELC MALAELAQVQ GHFMQAISLL QKALKKDEGN SDLWVQLSTA
CLHRFDKKAR KAAVRAVSLA EALEITDEQS LVLIKMKQAQ ANNALAEVEC QEQNFEVSEK
LYRDILAEHS HFLPALQGLG QQQMQQGNID EAVALFERIK DIDLLKGCSA LINVRRFPDD
VEALDKMAIA ANKPSMEGSL RAGILFQLAA AWEKKKDYNK AFRFAEQANN ASKKFLSYNA
QKHREDCARL RACFNKTLYQ HRPNYGIEST IPVYVLGMPR SGTTLVEQIL SGHSDIFGAG
ELGVIPQVIQ GINRWERHTG SGRQYPDCID DFNADTIAGI ANNMLKELQE LAAETKPESK
YVVDKMPHNF ENIGLIKFLF PNAKIISVRR DPRDIAMSNY FTDYQAKHGG MGFAYDLEHI
GEQLADHNLL MHHWQQTFPD EILEINYEDV VDDIEGCARK MLSYIGVNWQ PKVLKFNELV
RTVKTASVWQ VRQPIYKTSK GKWLRYQTRL TPLIKGTNAK IVSHPITDLL TLPEPGFLTD
GVALYKEGKL DDAEMCFKKM LHHNPGHAAC HYMIGLVYLT KNHAQDGIRH FEKAVASCPW
QKEWRQNLLK AYEQEGETNK IAAFKKGNQR TTANDANNAV TYDEHFTSDA FTTKTTVSQ
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