| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4326 |
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| Symbol | |
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| ID | 3520628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4553279 |
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| End bp | 4554682 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637286767 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_270976 |
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| Protein GI | 71280164 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.655626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAG TATGGACAAC TAATGGCAGG TTAAGTCGCA GGTATTCCTT ATCTATGCCT
AGCTTGTCAT TACTCATGTT GTCGTTAATC GTACTGGTAT CAATGGCAAT AGAGGCAGCA
GAGTTTCAGG CCCAGTATAC TCCTAATATA GAGGATAATA CTTCGACTAT GTCATCAGTT
ACGCTATTTA AACAGGGGGA TTTTACACAA CTTAAAAAGC GAACCTTACC ACGTGATTTT
TTAAACGCGT TACAAGCGGT TATCATTCAT AACCCAGCAT TAAAGGGCCA ACAAGCGGCT
CTTAATTCGT ATGAGGCGGA TATAGACAGT GCAAAAGCGA GACGCTACCC CACGCTGTCT
GCACAGGCTA ACAATTTAAA TAATGATGCA GACCAAGGAA CACTACGCTT AAATCAACCG
CTGTGGGCCT TTGGTAAAAT AGATACGGCG ATTGATGAAG CGACCGCCAA TTATACCGCT
GAGCAATGGG GCTTAATACA AAATCAGCGT GAGTTGATAA GCGATACCGC AAAAATTTAC
GCTAAAATAC AAGGGATTAA ACTACGTATT ACCGTGGCAA AACAGAATAT TAAGGAACAT
GAAAACTTAC ATGGTCGCAT TTCTCGTCGT CAACAAGGTC AGTTAGCCTC TAATGCCGAT
ACCCGCTTAG CTTACTCGCG TTTACTGCAA GCCCGTTCAA GATTACAACG TATTATGGGT
GAGGAATTAG TGGCTCAAGC TGAGTTACAG GCATTAACAC AAATACGGGT TTCAACGGAA
GGCGCTATTG ATGATAGTTT ATTAGGTTTG CCCGATCGTT TGGTGGTTAA TAAATTAGTA
ATGAAAAATG ATGCAAATAT TCGCTATAAG CGTGAGCAAC TTAAGGTGGT GCGTTTAAAT
TTAAAACAGG AAAAAGTGGC ATCACTGCCG ACCATTTCTT TTCGTGTTGA GTATGATTTT
TTAGATAACG ATATAAATGT CGACCAAACT CGGGCTGGCT TAGTATTTGA AAGTAATATG
GAAGGACTTG GCTTAGTAAG TGCAGGGCGT GTAAACGCCG CTGCTGCGCG TTTAAATGCC
GCAGATGAAG AGGTGAAATC TGCCTTGAAT GATGTTAGGC GCCAAGTTAA TGTGTTAATG
ATTAATAGGG GCGTGCAGCG AGACTTAATG CGTTCACAAA AAGATATAGT AGATGAAGTT
GAAGCGACGA TGGCATCGTT TTTACGCCAA TATAATTCAG GACGTAAATC ATGGGTAGAA
GTACTTAATA ACCAACGCGA GCTAACAGAG TTACGTTTAC AACTCGTACA GATAGCAAGT
GATTGGCAAC AGTTGTCGTT ACAGTTATTG ACCTTAATGG GAACCTTGGA TGATCCCGCA
GGATTAAAGC ATTATGAACA GTAA
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| Protein sequence | MQKVWTTNGR LSRRYSLSMP SLSLLMLSLI VLVSMAIEAA EFQAQYTPNI EDNTSTMSSV
TLFKQGDFTQ LKKRTLPRDF LNALQAVIIH NPALKGQQAA LNSYEADIDS AKARRYPTLS
AQANNLNNDA DQGTLRLNQP LWAFGKIDTA IDEATANYTA EQWGLIQNQR ELISDTAKIY
AKIQGIKLRI TVAKQNIKEH ENLHGRISRR QQGQLASNAD TRLAYSRLLQ ARSRLQRIMG
EELVAQAELQ ALTQIRVSTE GAIDDSLLGL PDRLVVNKLV MKNDANIRYK REQLKVVRLN
LKQEKVASLP TISFRVEYDF LDNDINVDQT RAGLVFESNM EGLGLVSAGR VNAAAARLNA
ADEEVKSALN DVRRQVNVLM INRGVQRDLM RSQKDIVDEV EATMASFLRQ YNSGRKSWVE
VLNNQRELTE LRLQLVQIAS DWQQLSLQLL TLMGTLDDPA GLKHYEQ
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