| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4275 |
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| Symbol | |
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| ID | 3523063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4505631 |
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| End bp | 4507214 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637286716 |
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| Product | TPR domain/sulfotransferase domain-containing protein |
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| Protein accession | YP_270925 |
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| Protein GI | 71282588 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAGCA CAATAAAAGT ATTACACCAG CAAGCACAAC AAGCCTTAAA TCAAGGTTTG
TATCAACAGG CACACCAACA TTTAATTTCA ATTTTACAGC AAGATAAGTA TTTTGCTGAC
GCCTATTTTT TATTAGCTAT GATTGCCAGT GCCCATCATA ATTTGGCAAA AGCAATTGAA
TTAATTAAAC AAGCTAATAG TCTTGCTCCT AATAACCCTG AGTATTTATC ACAACTTGCC
AAACATTATG CGCTCGAAAA TAATCATGTT GAAGCACTGT ACTTTGCAGA ACTTGCCGCT
AAGTTAATTG CTCAATTAAC GGTTCAATCC TCACTAACCT TAGATACGCT TGGCGTAGCG
TATAGTCAAA TGGGATTGCA TGAAAAAGCC GTTAAATTTT TTAAAAAATC AGTCGCTATT
AATGACAGAA ATCCAAATTA CTTTTTTAAT TTAGGTGCTT CATTAAAATT CATTGGTGAC
TTTGAGGGGG CTAGAAAAGC CTATAAAAAA ACTATTTCAA TGGCGCCCAA TTATTACAAA
GCACATTCAG CATTGACGGG TTTAGGCGGA ATATCAGAAG ACTACAATCA TATTCCTCTA
CTTGAGCGAT TATTTAAGCA AACGCAACAT GCGGACGACA GGTTACATAT AGGCCACGCT
CTAGCACGTG AATATGAAGC CTTAGAAGAT TTTGACAAAG CATTTTACTA CTTGGAAACA
GCTAAAAAAT TCAAACTTGA ACAATTGAAG TACAACATTG ATGAAGACAA AACGCTGTTC
AAGAGTCTTG CAAGCCACTT TAAAGACAGC AAGTATTCCC TATCTCAAGG CTTCGAAACA
GATGAAGCAA TATTTGTCGT GGGCATGCCA AGATCAGGTA CCACCTTGGT TGAACGAATC
ATTTCACAAC ATACTGACGT AACTAGTGCA GGGGAGTTGC AACACTTTGG TTTATTAGTT
AAAAAGATGA CTAAAACCAC TAGTAATCGT GTGATCGATG CAGAGACGGT AACAGCAACA
AAAGATATAA ATTTTAAAGC GTTAGGTAAA GCGTATATTG AAAGTACGAG AGCGATAACG
GGTAAAACAG CAAGGTTTGT CGATAAGATG CCATTAAATG TACTTTATGT TGGTTTTATC
CTACAAGCAT TACCCAAGGC AAAAATCATC TGCTTGGATA GAAACCCATT GGACACTATT
GTGAGTAATT TCAGACAGCT TTTTTCTGTT AATCAATCGT ACTACAGTTA TGCGTATGAT
CTGCAAACTA CGACAGAATT CTATTTGTTA TTCAAACAAC TCGCGGAATT GTGGTTAGCA
CTTTTTCCTG ACAATTTTTA TTTAATTAAT TATGAGAAAT TGGTTAACGA TCCTATCAAT
GAAGCTAAGC AGCTTATTGA GTTTTGTGAT CTTTCTTGGC AAGAACAATG TGTTGATATT
CATCAAAACT CAGCACCCGT TGCGACTGCT AGCGCGCTAC AAGTACGTAG TCCTATTAAT
AATCGTTCAG TAGATAACTG GAAAAAATAC GATGCTTATC TTGATGGTGT AAAAAAGAGT
TTAGCCACTA AGGTCGATAC TTAA
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| Protein sequence | MSSTIKVLHQ QAQQALNQGL YQQAHQHLIS ILQQDKYFAD AYFLLAMIAS AHHNLAKAIE
LIKQANSLAP NNPEYLSQLA KHYALENNHV EALYFAELAA KLIAQLTVQS SLTLDTLGVA
YSQMGLHEKA VKFFKKSVAI NDRNPNYFFN LGASLKFIGD FEGARKAYKK TISMAPNYYK
AHSALTGLGG ISEDYNHIPL LERLFKQTQH ADDRLHIGHA LAREYEALED FDKAFYYLET
AKKFKLEQLK YNIDEDKTLF KSLASHFKDS KYSLSQGFET DEAIFVVGMP RSGTTLVERI
ISQHTDVTSA GELQHFGLLV KKMTKTTSNR VIDAETVTAT KDINFKALGK AYIESTRAIT
GKTARFVDKM PLNVLYVGFI LQALPKAKII CLDRNPLDTI VSNFRQLFSV NQSYYSYAYD
LQTTTEFYLL FKQLAELWLA LFPDNFYLIN YEKLVNDPIN EAKQLIEFCD LSWQEQCVDI
HQNSAPVATA SALQVRSPIN NRSVDNWKKY DAYLDGVKKS LATKVDT
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