Gene CPS_4253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4253 
Symbol 
ID3521079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4481962 
End bp4482954 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content39% 
IMG OID637286694 
Producthypothetical protein 
Protein accessionYP_270903 
Protein GI71280611 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATG ATGTATCCCC TGCTGTAGAA GTAGATAAAG AACAACAAAG TGATGTTACC 
GAACAAGTCA CTGAACTAAA TGATTACATA GAAGTTTTGA GTCCTGGCGC TATGCTGAGT
GAAGCTCGCA AAGCGTTATC ACTTTCACAA GAGTTTATTT CCAGTAAACT GAACTTAAAA
GTAGCACTGG TTCAAAATAT TGAAGACGAT ATCTTTGACC CCTCAATGCC CGTTACTTTC
AATCGTGGCT ATTTAGCCAA TTATGCTAAA TTGGTTGGCG TTGAAGTAAA AGAGGTACTG
GCAAGTTATG ATGCGCTTGA TGCTGCGACT ATTCAACGCA GCGAAATGTT GAGCTTCTCT
AAAGAAACAT CTAAACAAGC AGAGCATAGC CGTGTTATGT GGTTAAGCTA TTTGATCGTG
GCTGTTTTGG TGGGATTGAC TGTATTATGG TGGCTACAAG AAAGCAGGCA GCAGGCGGAT
GACTCATCAA ATATGATTCC AAATACAGCT CCTGCTGAAA ACGTTAGTGG TGATGTTGTA
ACGACGAATA TCGAACCTTC TTCTTTGGCT ATTGAAACGG CGCCCGTTAA TGATAATGCT
CAGCTAAGTG AAAAAAAAGA TGAGATAGAA TTAGCATTAG ACACGAGCAC TAAAGCGCTA
ATAAATGATG CTAATAATGA TCTTAAAGCT TCAGCTAATA TTGTAGTAAA TGACGTTTCT
CAACCTGCAG AACCAGAAGT AGCAGCGATA AGTACTGCAG TGTTTACCTT TAAAGGTGAT
TGTTGGGTAA ATATTTATGA TGCAACGGGT GAGCGAATTG CTTGGGGTGT GAAAAAGTCA
GGTTATGTAA TGACTGTACA AGGTAAAGCA CCGCTGAGTA TTACTGTTGG AAAACCAGAG
TTAGCCAGTA TTGTTTTTAA TGATCAGCCA GTAGATATGT CGGCTTTTAA TGTTGGCAAT
ATTGCTAAAT TTAACTTACC TATTGTTGAG TAG
 
Protein sequence
MTNDVSPAVE VDKEQQSDVT EQVTELNDYI EVLSPGAMLS EARKALSLSQ EFISSKLNLK 
VALVQNIEDD IFDPSMPVTF NRGYLANYAK LVGVEVKEVL ASYDALDAAT IQRSEMLSFS
KETSKQAEHS RVMWLSYLIV AVLVGLTVLW WLQESRQQAD DSSNMIPNTA PAENVSGDVV
TTNIEPSSLA IETAPVNDNA QLSEKKDEIE LALDTSTKAL INDANNDLKA SANIVVNDVS
QPAEPEVAAI STAVFTFKGD CWVNIYDATG ERIAWGVKKS GYVMTVQGKA PLSITVGKPE
LASIVFNDQP VDMSAFNVGN IAKFNLPIVE