Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4239 |
Symbol | |
ID | 3522923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4466455 |
End bp | 4467174 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637286680 |
Product | hypothetical protein |
Protein accession | YP_270889 |
Protein GI | 71282449 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.21472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACAC TTTATGGGTT TGGCAAGTGC TTTAATGTGA TGGACGCTAG TCCATTTGTG GTTAAGGTTG ATCTTTTTAT GCGTATGGCG AATATTCCAT GCCAGGTTAA ATATGGCGCC AAGTATTTAA AAAAATCACC AAAAGGTAAA TTACCTTTCA TCAATGATAA CGGTACAGTG GTGGCTGATT CTGATGCCAT AATCACCTAC TTAACAAAAC AGTATCAGGT AACTTTAGAT GCCGAATTAA CACCAGAGCA GAAAGCACAA GCTCATTTAA TAACTAAGTC ATTAGATGAA GGTCTTTATT GGTGTTTGGT TTATTCTCGT TGGGCGACGG ATGAATGTTG GCCGTTAACC AATGAAGCTT TCTTTGCTAC TTTACCGATA CCACTGCGCT GGTTTTTACC TAATATTATT CGTAAATCGG TAAAGAAAAA CCTTCATGGC CAAGGCGTTG GTCGTCACTC ATTAGAAGAA ATTCTCGCTA TTTCAGATAA GAGCTTAGCG TCATTGTCCA CGCTTTTGGC AGATAAAAAT TTTTTCTTTG GCGACACTCA TACCTCATTT GATGCCGTCG TTTATTCGCA TTTATGTGAG TTTATTTCAG TGCGCTTTGA TAACGGTTTT GAAAGTAAAT TTACTAAAAA TGCCAAAAGA TACCAAAATC TAGTACAATT TTGTCAACGT ATTGAAGACA AATTTTATCC CGAGAAATAA
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Protein sequence | MITLYGFGKC FNVMDASPFV VKVDLFMRMA NIPCQVKYGA KYLKKSPKGK LPFINDNGTV VADSDAIITY LTKQYQVTLD AELTPEQKAQ AHLITKSLDE GLYWCLVYSR WATDECWPLT NEAFFATLPI PLRWFLPNII RKSVKKNLHG QGVGRHSLEE ILAISDKSLA SLSTLLADKN FFFGDTHTSF DAVVYSHLCE FISVRFDNGF ESKFTKNAKR YQNLVQFCQR IEDKFYPEK
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