| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4199 |
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| Symbol | gmd |
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| ID | 3519434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4420011 |
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| End bp | 4421135 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286641 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_270850 |
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| Protein GI | 71279076 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.400679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACAA AGAAAGTGGC TCTAATTACC GGTATTACTG GACAAGATGG TTCATATTTA
GCGGAGCTTT TATTAGAAAA AGGTTATGAG GTACATGGTA TTAAACGTCG TTCATCTTCA
TTAAATACCG AGCGAATTGA TCATATATAT CAAGATAATC ATGAAAAGAA TCAAAAATTT
TTCCTTCATT ATGGTGATTT AACCGACTCA TCAAACTTAA CCCGTATATT AAAAGATGTT
CAACCTGATG AAGTCTACAA TTTAGGTGCT CAATCTCACG TCGCTGTATC ATTCGAATGC
CCCGAATATA CTGCCGATGT TGATGCCATT GGTACCTTGC GACTACTTGA AGCTATTAGA
TTTTTAGGCC TAGAAAAGAA GACTAAATTT TATCAAGCCT CTACTTCCGA GTTATATGGT
GAAGTGCAAG AAATACCACA ATCAGAAACG ACGCCCTTTC ATCCTCGCTC CCCTTATGCT
GTTGCCAAAA TGTATGCTTA CTGGATAGTG GTAAATTATC GTGAGTCTTA TGGCATGTAT
GCCTGTAACG GTATTTTGTT TAACCATGAA TCTCCTCGTC GTGGTGAAAC GTTTGTGACC
AGAAAGATTA CTCGCGCGAT TGCCAATATT GCTCAAGGTT TAGAGTCATG TTTATACTTA
GGTAATATGG ATGCATTACG TGATTGGGGA CATGCAAAAG ATTATGTGCG AATGCAATGG
ATGATGTTAC AACAAGAACA TCCTGATGAT TTTGTTATTG CCACAGGTAA GCAAATTAGT
GTTCGTGAAT TTGTAACTTT GTCAGCACTT GAAGCAGGTA TAGAGCTAAC GTTTAGTGGT
GAAGGTTTAG ATGAAGTAGC ACGAGTAACT AAAATTATCG GAGATAACGC CCCAGCATTA
AGCGTTGGAG ATATCATGGT TAAAGTTGAC CCACGATATT TCCGCCCTGC TGAAGTTGAA
ACTCTGTTAG GTGATCCATC TAAAGCGAAA GAAAAACTAG GCTGGGTACC ACAAATTACA
GTGGAAGAAA TGTGTAGTGA AATGGTCGCT AACGATCTCA GTAAAGCAAA ACAACACGCC
ATTTTAAAAG CACATGGCTA CCAAAATTCG ACTAGCGTAG AATAA
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| Protein sequence | MTTKKVALIT GITGQDGSYL AELLLEKGYE VHGIKRRSSS LNTERIDHIY QDNHEKNQKF
FLHYGDLTDS SNLTRILKDV QPDEVYNLGA QSHVAVSFEC PEYTADVDAI GTLRLLEAIR
FLGLEKKTKF YQASTSELYG EVQEIPQSET TPFHPRSPYA VAKMYAYWIV VNYRESYGMY
ACNGILFNHE SPRRGETFVT RKITRAIANI AQGLESCLYL GNMDALRDWG HAKDYVRMQW
MMLQQEHPDD FVIATGKQIS VREFVTLSAL EAGIELTFSG EGLDEVARVT KIIGDNAPAL
SVGDIMVKVD PRYFRPAEVE TLLGDPSKAK EKLGWVPQIT VEEMCSEMVA NDLSKAKQHA
ILKAHGYQNS TSVE
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