| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4167 |
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| Symbol | |
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| ID | 3522506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4381987 |
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| End bp | 4384152 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286610 |
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| Product | sodium/dicarboxylate symporter family protein |
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| Protein accession | YP_270819 |
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| Protein GI | 71282034 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAG TAAACCTATA TAAAAAACTG AGCCCTTTTC AACGGGTAAT TATTGCTTTA
ATACTCGGTA TATCTACAGG TATTTTTGTT GGTGAACCGG CGGGGGATAT TAAAGTCATT
GGCGATGTTT ATATTCGCTT GCTTCAAATG ACCGTTTTAC CCTACGTACT CGTCTCTATT
ATTGGTGGCC TAGGTCGATT AGATAGTACG ATGGCAAGCC GTATAGGCTA CCGAGCAGTC
AAAGTAATCG TGATCATGTG GTTGTCTGTC ATGGCGACTT TATTATTGCT CCCCTTAGCT
TATCCTAATT GGGAAACAGC CGGTTTCTTC AGTACCAGCA TGCTGGCAGA GCCCGCCGCC
TTTAACTTTG TAAAACTTTA TATTCCGAGT AATATTTTTG CCTCACTCTC AGAAACTATT
GTTCCAGCAG TCGTGCTGTT TTCATTATTA ATGGGGATTG CCTTAATACA AGTCAAAAAT
AAAGAAACAC TATTAACCTT AACCACCAAT ATTGGTGATA GCTTAATGAA AGTTGCCTCT
TATGTAGCTA AATTAGCGCC ATTAGGGATT TTTGCTATTT CAGCTTCTGC TGCAGGTACA
CTAGAAGTTG AAGAACTTGG TCGATTACAA GTATTCTTAT GGGTATACAT CACCGCCGCA
GCCCTATTAG CTTTTGTATT TTTGCCATTA CTGATTCATT GGGCCACGCC TTTTTCCTAT
CGTGAAATTT TATCAACCGC TGGTGAAGCC GTGATAACGG CGTTAGCTAC TGGTACAGTG
TTAGTCGTGC TTCCAATGAT CATTGAGCGC AGTAAAGCTT TATTGGCTAA ACATGGTATG
GAGTGCGAAG AAACAGACTC AACCGTTGAT GTGCTTGTAC CTACTGCGTA CAGTTTTCCC
AGTACAGGTA CCTTACTGGG TTTAGGCTTT ATTCTATTTT CCGCTTGGTA TGTCGGCTCG
CCACTTGGCT TTGATGACTA TATTTCTTTT GTTATTATGG GCGCCTTAAC CGCTTTTGGT
AGCATGGCTG TTGCCATTCC ATTTTTACTC GACTTTTTTG ACTTACCTGC TGATCAATTC
CAATTATATC TATTAGGCAG TGTCGTTACT GCTCGTTTTG CTACAGGTTT AGCTGCACTA
CACGGCTTTG TCGTTACTTT ATTGGTCGCT TCTGCGGTAT TGAAAAAGCT TAGATGGCAT
CGAATGATGC AAGCCATTGG TGTGCATTTA GCCGTTACTT TGGGTGTTAT GATTGCAGCT
GGTTTTACTT TAAAGTCATT AATTCCTTAC AAGTATGAAG GTGTACAAAC ATTTGAATCA
ATGAAGTCGA TGAATGCAAG TGCTAACCTC GATCAATATA AAGAATTGAC ACCATTAGGC
TACTTTGAGC AGCAACAACC TCGCCTTGAG GTAATCCTTG CCCGTAAAGG TATTCGTGTT
GGTTATAACG ACGCTAGCTT GCCTTATGCC TTTAGAAATA AAGATAATAA AATGGTTGGA
TTTGATGTTG AGTTATTGAA CCAATTTGCT AAAGACCTTG ATATCAATTT ATCCATGATT
CGCATTGAAG AGGGAGCGGA TGAAGCCGAA TTATTAGCGG ATGGAAGTAT TGATATCATT
ATTGGTGGTC ATGTAATCAC ACCAAAGCGC GCATTAAAAA TGGCCTTTTC AGATGCTTAC
ACTTTCCATA CTGCTGGTTT ATTAGTGACA GATGCTAAAC GTGATCAGTT TTCTGACCTT
TATACCATTC AAGCAATGAA AACATTAAAG TTAGGGGTGG GAAATAGTAA GTATTACCAA
GACATGGTGA AAGAATATTT ACCTAATGCA CAATTAACAG AAGTGAATAA TGTTAGACAA
TTTCTTAAAG GTAACTATGA AGATGTCGAC GCGTTAATTT ACTCAACCGA GTCGGCTTCT
GCGTGGGCTA TGTTATACCC AAATTATTCG GCGATTATAC CTAAAGGTTT AAAACTAAGA
GCTCCGGTAG CCTTTGTATT ACCTAAAGGC CAGTTAGATT ATGTACAGTA TATGAATACT
TGGCTCAAAC TCAAAAAAGA GAATGGGTTA CAAAAGAAAG TATACGACTA TTGGATTTTA
GGTAAAAATC CTGAAGCGAA AAAACCACGT TGGTCGGTTA TGAAAGACGT GTTAGGTTGG
CTTTAA
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| Protein sequence | MPLVNLYKKL SPFQRVIIAL ILGISTGIFV GEPAGDIKVI GDVYIRLLQM TVLPYVLVSI
IGGLGRLDST MASRIGYRAV KVIVIMWLSV MATLLLLPLA YPNWETAGFF STSMLAEPAA
FNFVKLYIPS NIFASLSETI VPAVVLFSLL MGIALIQVKN KETLLTLTTN IGDSLMKVAS
YVAKLAPLGI FAISASAAGT LEVEELGRLQ VFLWVYITAA ALLAFVFLPL LIHWATPFSY
REILSTAGEA VITALATGTV LVVLPMIIER SKALLAKHGM ECEETDSTVD VLVPTAYSFP
STGTLLGLGF ILFSAWYVGS PLGFDDYISF VIMGALTAFG SMAVAIPFLL DFFDLPADQF
QLYLLGSVVT ARFATGLAAL HGFVVTLLVA SAVLKKLRWH RMMQAIGVHL AVTLGVMIAA
GFTLKSLIPY KYEGVQTFES MKSMNASANL DQYKELTPLG YFEQQQPRLE VILARKGIRV
GYNDASLPYA FRNKDNKMVG FDVELLNQFA KDLDINLSMI RIEEGADEAE LLADGSIDII
IGGHVITPKR ALKMAFSDAY TFHTAGLLVT DAKRDQFSDL YTIQAMKTLK LGVGNSKYYQ
DMVKEYLPNA QLTEVNNVRQ FLKGNYEDVD ALIYSTESAS AWAMLYPNYS AIIPKGLKLR
APVAFVLPKG QLDYVQYMNT WLKLKKENGL QKKVYDYWIL GKNPEAKKPR WSVMKDVLGW
L
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