Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4091 |
Symbol | bdhA2 |
ID | 3522755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4305144 |
End bp | 4305920 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637286534 |
Product | D-beta-hydroxybutyrate dehydrogenase |
Protein accession | YP_270746 |
Protein GI | 71282282 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.894673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTTA AAAAAACGGC TTTAGTAACG GGTTCTGTCA GTGGTATTGG CTTAGGAATA GCAAAAGATT TAGCCAAGCA AGGTTATAAA ATCCTTATTA GTGATATAAA TTTATCTGTG GCTGAAGATG TAGCACAAAG TATTAACCAG TCAGGAGGAG ATGCGTTAGC GTTTAAACTT GATGTTACTG TGCAAGCAGA CATTGATAAT GTTATTGCTC GTGCGGAAGA ATTTAATAAT CGCATTGACG TATTAGTTAA CAATGCAGGT ATTCAATATG TTTCGAAATT AGAAGAGTTT CCCGCAGAGA AGTGGCAGTT GATTACTAAT GTACTATTAG TTGGCCCAGC AATGATGACT AAAGCGGTAT TACCTTTAAT GCGTGCTAAT AATTTTGGCC GTATTATTAA TATTGGCTCT TTGCATGGCT TAGTCGCCTC TCCATTCAAA AGTGCCTATG TTGCAGCTAA ACATGGGATT ATCGGTTTTT CTAAAGTTAT TGCGTTAGAA ACAGGAGATC AAGATATTAC TATTAATACT ATTTGTCCTG CCTATGTGAA AACGCCACTG GTTGAGAAAC AAATTGCAGA TACGGCTAAA GAGCATGGTA TCAGTGAAGA AGAAGTTGTT AATAATATTA TGCTGGCGCC AATGCCGAAA AAAGCGTTTA TTGATATAGA AGAAATATGT GGTTCAGTAA GTTATTTAGC CAGTGATCTC GCTAAAAATA TGACAGGACA AACCATGGTA TTAGACGGTG GTTGGGTAGC AAGATAG
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Protein sequence | MTLKKTALVT GSVSGIGLGI AKDLAKQGYK ILISDINLSV AEDVAQSINQ SGGDALAFKL DVTVQADIDN VIARAEEFNN RIDVLVNNAG IQYVSKLEEF PAEKWQLITN VLLVGPAMMT KAVLPLMRAN NFGRIINIGS LHGLVASPFK SAYVAAKHGI IGFSKVIALE TGDQDITINT ICPAYVKTPL VEKQIADTAK EHGISEEEVV NNIMLAPMPK KAFIDIEEIC GSVSYLASDL AKNMTGQTMV LDGGWVAR
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