Gene CPS_4091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4091 
SymbolbdhA2 
ID3522755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4305144 
End bp4305920 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content37% 
IMG OID637286534 
ProductD-beta-hydroxybutyrate dehydrogenase 
Protein accessionYP_270746 
Protein GI71282282 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.894673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTTA AAAAAACGGC TTTAGTAACG GGTTCTGTCA GTGGTATTGG CTTAGGAATA 
GCAAAAGATT TAGCCAAGCA AGGTTATAAA ATCCTTATTA GTGATATAAA TTTATCTGTG
GCTGAAGATG TAGCACAAAG TATTAACCAG TCAGGAGGAG ATGCGTTAGC GTTTAAACTT
GATGTTACTG TGCAAGCAGA CATTGATAAT GTTATTGCTC GTGCGGAAGA ATTTAATAAT
CGCATTGACG TATTAGTTAA CAATGCAGGT ATTCAATATG TTTCGAAATT AGAAGAGTTT
CCCGCAGAGA AGTGGCAGTT GATTACTAAT GTACTATTAG TTGGCCCAGC AATGATGACT
AAAGCGGTAT TACCTTTAAT GCGTGCTAAT AATTTTGGCC GTATTATTAA TATTGGCTCT
TTGCATGGCT TAGTCGCCTC TCCATTCAAA AGTGCCTATG TTGCAGCTAA ACATGGGATT
ATCGGTTTTT CTAAAGTTAT TGCGTTAGAA ACAGGAGATC AAGATATTAC TATTAATACT
ATTTGTCCTG CCTATGTGAA AACGCCACTG GTTGAGAAAC AAATTGCAGA TACGGCTAAA
GAGCATGGTA TCAGTGAAGA AGAAGTTGTT AATAATATTA TGCTGGCGCC AATGCCGAAA
AAAGCGTTTA TTGATATAGA AGAAATATGT GGTTCAGTAA GTTATTTAGC CAGTGATCTC
GCTAAAAATA TGACAGGACA AACCATGGTA TTAGACGGTG GTTGGGTAGC AAGATAG
 
Protein sequence
MTLKKTALVT GSVSGIGLGI AKDLAKQGYK ILISDINLSV AEDVAQSINQ SGGDALAFKL 
DVTVQADIDN VIARAEEFNN RIDVLVNNAG IQYVSKLEEF PAEKWQLITN VLLVGPAMMT
KAVLPLMRAN NFGRIINIGS LHGLVASPFK SAYVAAKHGI IGFSKVIALE TGDQDITINT
ICPAYVKTPL VEKQIADTAK EHGISEEEVV NNIMLAPMPK KAFIDIEEIC GSVSYLASDL
AKNMTGQTMV LDGGWVAR