| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4039 |
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| Symbol | |
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| ID | 3520447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4246460 |
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| End bp | 4247656 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637286485 |
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| Product | putative glutathione-independent formaldehyde dehydrogenase |
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| Protein accession | YP_270697 |
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| Protein GI | 71279984 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCTCAA ATCATGGAAA CCGCGGCGTT GTTTATACTG GCCCTGGAAG TGTTGAAATT
CAAGATATTG CCTACCCTAA GCTTGCCATT GGCAATCGAA AATGTGAGCA CGGTGTTATT
TTAAAAGTAG TAACTACCAA TATTTGTGGC AGTGATCAAC ATATGGTACG TGGCCGTACT
ACCGCTGAAC CTGGGCTTGT TTTAGGTCAT GAAATTACCG GTATGATCAT TGAAAAAGGC
AGCGATGTAG AGTTTTTAGA CATTGGTGAT ATTGTCTCTG TACCTTTTAA TATTGCTTGT
GGTCGCTGTA GAAACTGTCG CGAAGGAAAC ACAGGTATTT GCTTAAACGT TAATCCTGGT
CGCGCTGGTG CCGCCTTTGG TTACGTTGAT ATGGGCGGCT GGGTTGGTGG TCAATCTGAA
TATGTGATGG TGCCTTATGC TGACTTCAAC CTGCTAAAAT TTCCTGATAA AGATCAGGCA
TTAGAAAAAA TTCGTGACTT GACCATGCTC TCTGATATTT TCCCAACGGG ATATCATGGT
GCTGTAACTG CTGGTGTTGT TCCTGGTGCC ACAGTTTATA TTGCTGGTGC TGGACCTGTA
GGTCTTGCTG CTGCAGCTTC ATCACAATTA CTTGGCGCGG CTTGTGTCAT TGTAGGTGAT
ATGAATCCAG AGCGTCTAGC TCAAGCTCGT AGCTTTGGCT GTGAAACTAT CGATTTACGT
CAAGATGCCA CAGTGCCAGA TATGATAGAA CAAATATTAG GTGTTCCAGA AGTAGATGCT
GCTGTGGATT GTGTTGGTTT TGAAGCCCAC AGCCACGGTT GTAGTCATCA TAAAGAACAG
CCTGCAATTG TACTTAATAC TATGATGGAA GTAACACGTG CTGGGGGTGG TATCGGTATT
CCAGGGCTTT ATGTAACTGG CGATCCAGGT GCATCTACTG AAGCGGCTAA AACTGGCCAA
CTTAGTATGA ATTTTGGTCT TGGTTGGGCG AAATCACATT ATTTTGTTAC CGGTCAATGT
CCAGTAATGA AATATCATCG CAACCTAATG CAGGCTATTT TGTGGGATAA AGTTCAAATT
GCTAAAGCGG TTAACGTGAA AGTCATTTCA CTTGATGGTG CACCTGAAGG TTATAATGCC
TTTGATAAAG GCGCCGCACA AAAGTTTGTC ATTGACCCTC ATTCAATGGT GGTTTAA
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| Protein sequence | MCSNHGNRGV VYTGPGSVEI QDIAYPKLAI GNRKCEHGVI LKVVTTNICG SDQHMVRGRT
TAEPGLVLGH EITGMIIEKG SDVEFLDIGD IVSVPFNIAC GRCRNCREGN TGICLNVNPG
RAGAAFGYVD MGGWVGGQSE YVMVPYADFN LLKFPDKDQA LEKIRDLTML SDIFPTGYHG
AVTAGVVPGA TVYIAGAGPV GLAAAASSQL LGAACVIVGD MNPERLAQAR SFGCETIDLR
QDATVPDMIE QILGVPEVDA AVDCVGFEAH SHGCSHHKEQ PAIVLNTMME VTRAGGGIGI
PGLYVTGDPG ASTEAAKTGQ LSMNFGLGWA KSHYFVTGQC PVMKYHRNLM QAILWDKVQI
AKAVNVKVIS LDGAPEGYNA FDKGAAQKFV IDPHSMVV
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