Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4004 |
Symbol | |
ID | 3518380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4202066 |
End bp | 4202656 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286450 |
Product | TetR family transcriptional regulator |
Protein accession | YP_270662 |
Protein GI | 71278787 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.638592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGAAT CTCCCAAAAA AAAGCGGTTA CCACGTGGTC AAGGACGAGA ACGTATTTTA TCTTCGGCTG CAGATCTATT TTTGAAAAAT GGCTTTGAAG CAACCAGTCC TCAAGCAATT TATGCGGCAA GTGGTGTCGG GCAAGGAAGT TTTTACCATC ATTTTGCCAG TAAAGATGAT TTGGCAAATG CAGTTTTGGA AAGAATAGTA GAAGAAAAAA CCGCTGAATT AAATCACATT ACGAGCACTA TACCTAATCC AAAGAAGCGT TTAGAGGCAT ACCTAAAATT ACCTCGCAAA GGAACCGAAG GCTGCAAATT TGGGCGTTTC ATGTATGAGA CTTCAGGGCA AAAACAGCAA TTAAATAAAC CTATTCAAGG ATTCTTTGAT GAACTGCAGC GCTTTCTCAG TCATAACTTT CAGACAGCGC AAAACCAAGG ATTAATTTCA TCAGATTTCT CTGCCCAAGA GTTAAGTTCT ATTCTGATGG AACAAGTACA AGGTGGATAT ATAATGTCGA GGATCTATCA AAGTGATGAT CTCCAAGTTA ATACACTGAA ACGTCTGGCG AAACAATTAG GATTAACGTA G
|
Protein sequence | MSESPKKKRL PRGQGRERIL SSAADLFLKN GFEATSPQAI YAASGVGQGS FYHHFASKDD LANAVLERIV EEKTAELNHI TSTIPNPKKR LEAYLKLPRK GTEGCKFGRF MYETSGQKQQ LNKPIQGFFD ELQRFLSHNF QTAQNQGLIS SDFSAQELSS ILMEQVQGGY IMSRIYQSDD LQVNTLKRLA KQLGLT
|
| |