Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3974 |
Symbol | exbB3 |
ID | 3521247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4168068 |
End bp | 4168595 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637286420 |
Product | biopolymer transport exbB protein |
Protein accession | YP_270632 |
Protein GI | 71280778 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTGCCT TAATGGAAAT GTACGATGCC ATTAATGAGT TTATGGATAC CGGTGGTCAA GTATTAATCG TGATTGCCGC TGTTATCTTC ATTATGTGGT TGTTGATTTT TGAACGCTTT GTCTTTGTTT TTTACAGCTA TCGCAGTGTA AAGAAACATA TGGTCAGTGT ATGGCAAGGT CGCAAAGATC AAACGTCTTG GTACAGCGAA CAAATACGCA ACGCGCTAAT TTCTCGTGGT ACGACTAAGT TAAATCGTAA TTTAGCACTT ATTCAATCCC TGGTTGTCTT GTGTCCGCTG TTAGGTTTAC TGGGCACGGT AACAGGCATG ATTGAGGTGT TTGATGTGAT GGCAATATCA GGAAGCGGTA ATGCAAGGTC GATGGCATCG GGTGTATCAC GAGCTACTAT CCCTACTATG GCAGGTATGG TCGGTTCACT ATCAGGTGTA TTTACTGCAA CTTGGTTACG CCGAAACGCT AAAAAAGAAG CTGAATTGCT CGCCGATAGT TTAACGGTTA GTCATTAA
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Protein sequence | MIALMEMYDA INEFMDTGGQ VLIVIAAVIF IMWLLIFERF VFVFYSYRSV KKHMVSVWQG RKDQTSWYSE QIRNALISRG TTKLNRNLAL IQSLVVLCPL LGLLGTVTGM IEVFDVMAIS GSGNARSMAS GVSRATIPTM AGMVGSLSGV FTATWLRRNA KKEAELLADS LTVSH
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