Gene CPS_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3974 
SymbolexbB3 
ID3521247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4168068 
End bp4168595 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content42% 
IMG OID637286420 
Productbiopolymer transport exbB protein 
Protein accessionYP_270632 
Protein GI71280778 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGCCT TAATGGAAAT GTACGATGCC ATTAATGAGT TTATGGATAC CGGTGGTCAA 
GTATTAATCG TGATTGCCGC TGTTATCTTC ATTATGTGGT TGTTGATTTT TGAACGCTTT
GTCTTTGTTT TTTACAGCTA TCGCAGTGTA AAGAAACATA TGGTCAGTGT ATGGCAAGGT
CGCAAAGATC AAACGTCTTG GTACAGCGAA CAAATACGCA ACGCGCTAAT TTCTCGTGGT
ACGACTAAGT TAAATCGTAA TTTAGCACTT ATTCAATCCC TGGTTGTCTT GTGTCCGCTG
TTAGGTTTAC TGGGCACGGT AACAGGCATG ATTGAGGTGT TTGATGTGAT GGCAATATCA
GGAAGCGGTA ATGCAAGGTC GATGGCATCG GGTGTATCAC GAGCTACTAT CCCTACTATG
GCAGGTATGG TCGGTTCACT ATCAGGTGTA TTTACTGCAA CTTGGTTACG CCGAAACGCT
AAAAAAGAAG CTGAATTGCT CGCCGATAGT TTAACGGTTA GTCATTAA
 
Protein sequence
MIALMEMYDA INEFMDTGGQ VLIVIAAVIF IMWLLIFERF VFVFYSYRSV KKHMVSVWQG 
RKDQTSWYSE QIRNALISRG TTKLNRNLAL IQSLVVLCPL LGLLGTVTGM IEVFDVMAIS
GSGNARSMAS GVSRATIPTM AGMVGSLSGV FTATWLRRNA KKEAELLADS LTVSH