| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3972 |
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| Symbol | |
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| ID | 3521828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4166889 |
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| End bp | 4167560 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637286418 |
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| Product | putative TonB protein |
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| Protein accession | YP_270630 |
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| Protein GI | 71281356 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACAA ACATGCCAAT AAATATGTCA ACAGATACGT CACAACAAAT CATAGTACGC
AGTGGCGCTC GATACGTTAT TGCGGGCGCA TTAGCATTAA GTATGACCTT TCTCTTACTG
TGGGGAATGC AAAAGTTAAT TGCCGGTGGC AATGAAGTGA TGACAGACCC TGCCAAAGGC
AGTGTGCTTG ATTTCATCCG CTTAAAAAAA GATGAAGCGA TTGTTAAAAA AGAGCGTAAA
CCGCAAAAAC CAGCTAAGCC AAAAGAGCCG CCACCACCAA TGAACGCACC TCAAATGCAG
CAGTCCACCC CTAATGCGAA TGCGGCGAAA AGTAGTTTTG CAGCGGATAT TCAAGGGGAT
ATTGGTTTAT CGGGTGGTTT GAGCTTAGAC AGTGGCGATG GTGATTATTT GCCGATTGTT
AAGGTGGCTG CTATTTATCC ACGACGTGCG CAATCTCGTG GTATTGAAGG CTTTGTTATT
GTTGAGTTTG TTGTGACCAA AACAGGCTCA GTCAGTCATG CCAAGGTAGT GCAAGCAAAA
CCTGAAGGGA TATTTGATAG AGCTGCCCTT GATGCGGTTG CTAAGTTCAA ATACAAACCA
CGTGTTGTTG ATGGTGTTGC CATGGAAGTG GCTGGCGTAC AGAACAAAAT TAGTTTTGAA
ATTGATGGTT AA
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| Protein sequence | MSTNMPINMS TDTSQQIIVR SGARYVIAGA LALSMTFLLL WGMQKLIAGG NEVMTDPAKG
SVLDFIRLKK DEAIVKKERK PQKPAKPKEP PPPMNAPQMQ QSTPNANAAK SSFAADIQGD
IGLSGGLSLD SGDGDYLPIV KVAAIYPRRA QSRGIEGFVI VEFVVTKTGS VSHAKVVQAK
PEGIFDRAAL DAVAKFKYKP RVVDGVAMEV AGVQNKISFE IDG
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