| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3939 |
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| Symbol | |
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| ID | 3522500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4123394 |
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| End bp | 4125070 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286385 |
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| Product | pyridoxamine 5'-phosphate oxidase / oxidoreductase, NAD-dependent |
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| Protein accession | YP_270597 |
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| Protein GI | 71282028 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
[COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACATA AATACGCACA ACTAGCCTTT ACTGAGACAG TAAGAGCAAT GCAGCAAGAG
CAGAATAGCC GAGCAGGTTA TGCCAGTATG GACCAAGGTG AGGATTACAA TTTTCTCTTA
TCCGCAGTTG AAGCCGAGTT TATTGCCCAA CGAGATAGTT TATATATGGC CAGCGTTAGT
GAAACCGATT GGCCTTATGT TCAACACCGT GGCGGACCTA AAGGTTTTTT GAAGGTGCTT
GATGCTTCTA CATTAGGTTT TGCTGATTAT AAAGGTAATC GCCAGTATGT AAGTGCAGGA
AATTTCCGTA ATAATGATCG TGTTGCTTTG ATATTTGTCG ATTATCCAAA TAAACGTCGC
TTAAAATTGA TGGGACGAAT CAGTCAAGTA GCTGAAGATG ATTGGCAAAC ACTTGCCAGT
CTTGAAGATG ATGATTATCG AGCTAAAGTA GAGCGAGGTT TTGTTATTAA AGTCGAAGCA
TTTGATTGGA ACTGCCCACA GCATATAACA CCTAGATATA GTGAAAGTGA AATTGAGTCA
TTAATTATTC CGCTAACGAA TGAGCTTTCA GACCTAAAAG CACAGTTGAA AACGCAGCAG
CTTGCCTCGT CATCAGGTGA AGGTTTATCA AAAAACAGTG CAGTAGCCAA AGTAAGCTTA
CCTGATTATC CGAAAATATC TGGAGAGGGA GAGTTACCGT TAGTTATTAG TGGTATTAGA
CAATTGACCC CTCGTATTAG AGCTATTGAG CTCAGACATG TAAAGGGTGA GGCATTACCT
GCTTTTGAGG CCGGTGCACA CTTGGCAATA CCTGTAGTAT TAAATGATGG GAAAGTTACG
CACAGACATT ATTCACTTTG TTCAAATCCC AGTAGAACTG ATTGTTATGA AATTGCCGTA
CTAAATGATC ATAATGAGTT GAAAGAAGAC AATAACGTAG ATAATAGCGA TATTGAAGAA
AGTGGCTCTG CGGTTATTCA TCAATATTTC ACACTTGGGC TCAGGTTAAA CTGTGTACAG
CCGCAAAATT ACTTTCCCCT TGAACAGTCA ACAGATCCTG TTGTGTTGAT CGCTGGTGGT
ATTGGTATTA CCCCCATTAA AGCGATGGCC TTAACGCTAA CCAGTCAGCA GCGTGATTTT
TCACTGCATT ATTGCGGTCG CTCAATCGAT GAAATGGCCT TCAGTGATCG ACTAAGCAGG
CAACTAGGCG ATAAATTATA TCTATACGCG AGTGATGAAG GCAATAAACT AAATTTAGAA
AAGCTATTAA CTAGCTCTCC TATAAAGGCA CACTTTTACT TTTGTGGCCC GCAAAAGATG
ATAGATCAGT TGCTTGAACT GGCTAAACAG CATGGCATTG ATAGTACACG CCTACATTTT
GAGCGTTTTG AGCATAAGAT AGATGCTACG GCAAAACCCT TTACTGTGAC ACTTAAACGC
TCTTCAAAAC AATTTACGGT GTCGGCCCAA GAATCTATTT TAGACGCAGT ATTAGCTCAA
GGTATTAATG TGCCTTACAG TTGTAAAACG GGCGAATGTA AAACGTGTGT TGTTCCTGTA
GTTAACGGCA ATGTTATCCA CAAAGATGAA TGTCTAACTA ACACCGACAA AGTAAATAAG
CTTATGTGTC TGTGCGTCTC TAGAGCTGCC CAAGATACGT TAGAGCTGGA TCTTTAA
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| Protein sequence | MAHKYAQLAF TETVRAMQQE QNSRAGYASM DQGEDYNFLL SAVEAEFIAQ RDSLYMASVS
ETDWPYVQHR GGPKGFLKVL DASTLGFADY KGNRQYVSAG NFRNNDRVAL IFVDYPNKRR
LKLMGRISQV AEDDWQTLAS LEDDDYRAKV ERGFVIKVEA FDWNCPQHIT PRYSESEIES
LIIPLTNELS DLKAQLKTQQ LASSSGEGLS KNSAVAKVSL PDYPKISGEG ELPLVISGIR
QLTPRIRAIE LRHVKGEALP AFEAGAHLAI PVVLNDGKVT HRHYSLCSNP SRTDCYEIAV
LNDHNELKED NNVDNSDIEE SGSAVIHQYF TLGLRLNCVQ PQNYFPLEQS TDPVVLIAGG
IGITPIKAMA LTLTSQQRDF SLHYCGRSID EMAFSDRLSR QLGDKLYLYA SDEGNKLNLE
KLLTSSPIKA HFYFCGPQKM IDQLLELAKQ HGIDSTRLHF ERFEHKIDAT AKPFTVTLKR
SSKQFTVSAQ ESILDAVLAQ GINVPYSCKT GECKTCVVPV VNGNVIHKDE CLTNTDKVNK
LMCLCVSRAA QDTLELDL
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