Gene CPS_3937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3937 
Symbol 
ID3521950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp4121053 
End bp4121721 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content39% 
IMG OID637286383 
Producthypothetical protein 
Protein accessionYP_270595 
Protein GI71281478 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.479682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCCAG CTAAGCATTA TCAAACAAAT GAAGAAAACA TTACCCATTA TCATGAGATT 
ATTGAGAGTA ACCCCTTAGC AACACTACTA TTTAGTCATG AATCAGAGAT TGACGTTAGT 
CATATTCCTT GTCACTTTTC TCTCAAGACT TCTAACACGA ACACACAGCA ACTAGAAAGA 
AGCACGCTTA CGGCTCATGT GAGTAATCAT CACCCGTTAG CCAAAGTGCT ACAGCGTTCA 
TCAACAGTAG CCCTTCAATT AGTTTTTCAT GGTGAAGATG CGTACATATC ACCACGGGAT 
GTTTCTAAGC AACATAGCCA TGCGCAAAGC GTACCCACTT GGAATTATGC CAAGGTACAT 
GTATCTGGTA TCGCCCATGA GGTAAAGGAT AGTGATGATA AGTATCAATA TATGGCAGCG 
AGTACCGCTT ACTTCGAGCA ACGTCGTTCG ACAAACAACA TCGATAAGCC ATGGTCTATA 
GAAGAGGCTC CAGCAATTGC CATTAAAAAA ATGCTTAATG CTATTACTAT TTTTAGTATT 
AATATTACTC ACCTTGAAGG CAGATTTAAG CTCAGTCAAA ACAAATCGAA AGCAGTACAA 
AAAGAGATAG CAGAACAATT AACAACAAGG GGTGTTGAAG AGCTAGGACA ACTTATGCTT 
GCACTTTAA
 
Protein sequence
MYPAKHYQTN EENITHYHEI IESNPLATLL FSHESEIDVS HIPCHFSLKT SNTNTQQLER 
STLTAHVSNH HPLAKVLQRS STVALQLVFH GEDAYISPRD VSKQHSHAQS VPTWNYAKVH 
VSGIAHEVKD SDDKYQYMAA STAYFEQRRS TNNIDKPWSI EEAPAIAIKK MLNAITIFSI 
NITHLEGRFK LSQNKSKAVQ KEIAEQLTTR GVEELGQLML AL