| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3847 |
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| Symbol | |
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| ID | 3522418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4016256 |
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| End bp | 4017320 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286293 |
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| Product | porin |
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| Protein accession | YP_270509 |
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| Protein GI | 71281946 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACT TTAAAATCAA AAAATCATTA ATCGCTTTAG CACTTGTTTT ACCAGCCTTT
GCTTCTTATG CAGAAACGTC TGAAGAAAAC TTGAAAAAAC AGCTTACTGA AATTCAAACG
CGTTTAGCAC AATTAGAAGA GTCTAAAGAG CCAGCGGCTA CTTCAGACAA TACCTCTATT
AATTTTTACG GTTCTTTACG TCCTACTTTT GGTCTAACAA GCACTGATTC TGCTGATAGC
TGGGATGTTG GTGATGCATT ATCACGTATC GGTATCGCAG CAGAGCATAA ATTAAGCAAT
GGTATGACTG GTTTTGCAAA AGGTGAGTTT AAAGTTCAAA TTCAAGGTGA TGCGAGTTTT
GGCGATGCAC GTAAAGCATA TGTTGGTATA AAGGGTGATT TTGGTCGTGT TGCCATTGGT
AAACAGGATA CAACTCAATA CGCAATCATT GGTGACCCAG TTGATATTTT CAACCGTGCA
TCAACACCAC TTGCCTATGA TGACGCTAGC CCATTCCGTC AACAAGAAAT GGTTAGCTAC
AGAAAGAACT TTGGTAACTT AGAATTTCGC ATTGAAGGTC AATTCAAAGG CGAAACAGAT
ATTGAAGGTA GTGATTTAGT TAACGGTGGT TTTAAATATT CTGGTGATAG CTTTACTTTA
GCTGCTGCTT ACCTAACTAG AGACATGCCT GGTACTGATG AAAACACAGT AGGTGTATCT
GGTTCAAAAT CATTTGGTGA CTTATATATT GCCGCAGCTT ATCAAGACAT TGACCGTGGT
GGTAATGGTC AAGATAGAAC GACTATTGAT TTAGTTGGTG CATACAAAAT TAATGAAATC
TACAAAGTTA AAATGGGCTA TTCTATATTT TCAGACGATT TAGTACCTGT AGCTAGTAAA
GAAATCACTC GCATCAATGC CACAGTAGAA TGGCACGGTA GCCCAGATTT CTACTTATTT
GCTGAAGTTC AAAACAATAG CTATGATGAT GAAGTTGCAG GTAATAAAGA AGACAGCAAT
CAATTTATCG TAGGTATGCG TTACAACTTC GATTATAGCT TTTAA
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| Protein sequence | MNNFKIKKSL IALALVLPAF ASYAETSEEN LKKQLTEIQT RLAQLEESKE PAATSDNTSI
NFYGSLRPTF GLTSTDSADS WDVGDALSRI GIAAEHKLSN GMTGFAKGEF KVQIQGDASF
GDARKAYVGI KGDFGRVAIG KQDTTQYAII GDPVDIFNRA STPLAYDDAS PFRQQEMVSY
RKNFGNLEFR IEGQFKGETD IEGSDLVNGG FKYSGDSFTL AAAYLTRDMP GTDENTVGVS
GSKSFGDLYI AAAYQDIDRG GNGQDRTTID LVGAYKINEI YKVKMGYSIF SDDLVPVASK
EITRINATVE WHGSPDFYLF AEVQNNSYDD EVAGNKEDSN QFIVGMRYNF DYSF
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