Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3815 |
Symbol | |
ID | 3520885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3980306 |
End bp | 3980842 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286262 |
Product | putative monovalent cation/H+ antiporter subunit E |
Protein accession | YP_270478 |
Protein GI | 71280419 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.306964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGTTAG ATACACGGTT TAAATGGCTA CCCGCTCCAA TATTGAGCAT TTTACTATTT CTTGTCTGGT TATTATTAAA TAACAGTGTA TCGGCTGGGC ATATTGTATT AGCTGTTATC TTAGCCATAG TGATTCCATT GGCGACTAGC CCATTTAGAA CTAAGCAGCC ATTAATTATC AAGCCAGGTT TAGCGATACG TCATCTACTG TTGGTTTTAT ATGACATCGT TACTGCGAAT GTACAGGTTG CTATTTTGAT CTTAGGTCCG ACCAAAAAAC TGACTCCTGG CTTCATCAAG GTGCCGTTAG ACTTAACACA CAGTATGCCA ATTACCATTT TAGCTAGTAC TGTGTCATTA ACACCGGGCA CAGTCAGCGC AGAGGTGCTG CCTTGGACAG AGACTTTCAT CGAAGGACAG GATTCGGAAC AACGATTTTT ACTGATACAC GTTTTAGATC TTAAAGACGA ACAAGCCTTA ATAAACACAA TTAAGCAACG TTATGAAGCC CCTCTTATGG AGATATTTCA ATGCTAG
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Protein sequence | MRLDTRFKWL PAPILSILLF LVWLLLNNSV SAGHIVLAVI LAIVIPLATS PFRTKQPLII KPGLAIRHLL LVLYDIVTAN VQVAILILGP TKKLTPGFIK VPLDLTHSMP ITILASTVSL TPGTVSAEVL PWTETFIEGQ DSEQRFLLIH VLDLKDEQAL INTIKQRYEA PLMEIFQC
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