| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3804 |
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| Symbol | |
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| ID | 3520055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3966344 |
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| End bp | 3969832 |
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| Gene Length | 3489 bp |
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| Protein Length | 1162 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286251 |
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| Product | hypothetical protein |
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| Protein accession | YP_270467 |
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| Protein GI | 71279596 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.866063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACATT TATTGCGCCT GTGCCTATGG CAGGCGGTTA TTATTGGCAT ACTTACGGCT
CACTTCCCCG TTAATGCAGA GGAAGAACGC GGCATTCGCA TGCGAGGACC TAAAAGTAGT
GATGTTTTTC CTTATGATAA ATACGGCCCA ATCACCTCTA AAGATACTTT ATGGAACATC
GCTACTCGAG TTCGCCCTGA TAATCGCTTG AGCGTTTATC AAGTCATGCA GGCGTTATAT
CAAGAGAATC CACAAGCGTT TGTCGATAGC AACATCAATT ATTTGGTTGA AGGGCAATAT
TTAAAAATAC CATCGTTTAA TAACATGATG GCAATAAATA CTAACAGTGC GAAGAAAAAG
TCTGAAAGTG ATAGTAAAGC TTGGAAGAAA GCACAGCCAA AAACACCTAA GATACCAGTA
TTTATAGAGC CTAGCGTTAA GAAAAAAGAC TTAGAGACGG TAAAAACTGA GATTAATGAC
CAATTGCAAA AAATTGATGG TCAGCAGCAG GAACGATTAG AACATATTCA AAATGATATC
TCAGACTCAA TTGATGGTTT ACAAGCTATT TTAAAAGAAA ATGATGATTT ACGTCAGCAA
CTTACTTCCT TTAATGACAA GCTTGGCATC ATGCAGGATG AGGTAGCGAA AGGTAAAGAA
ATCAAGCTGC AAATGGACGA TATGATCAAG TTGCAGCAAG CCCTATTAGC AAAAGCTGAA
GCCAGAGAAA AAGAACTTTT ATTAGAGAGA CAGCAGGCTG CACTTGCGGA ACAAGATATC
ATGTCAAGCT TGTGGTTCAA AATTGCCATG GGCACTCTGC CAGCAATCCT GATACTACTT
TTACTGGCTC TTTTGTTTAA ACGCCGAAAA CAGGCCTCGG ATGAAGTTTT CTTCAACGAA
TTAGACAGTA AAAAACAAGA ACCTGTCGCC AAAAAGGAGA GCACATCTGA AGAGTTATCA
CTTGATGATG AGTTAAACTT GGACGATGAG CTTGATTTAT CACTTGATGG TGAGTTGAAC
TTGGACGATG AGCTTGATTT ATCCCTTGAT GATGAATTGA ATTTAGACGA TGAGCTTGAT
TTATCACTTG ATGATGAATT GAATTTGGAT GATGACCTGT CTATAGATTT AATAGAAAGT
GATGATGACG TTATCCATTT GGATGAAGAC GATAGCTTAG ATGATCTTGA AGACATCCTA
CTAGATGATG AAAGTGACGT TGATATTCTT GATGGTGGTG AGTTGGATCA AGATGACTTA
GATTCATTAT TATCAGGTTT AGATGATGAA GCAGAAAATA CAGAAAGTGA AGAACTTGAA
GGGGGAGAGT TAAGTCAAGA TGATCTAAAT GATTTACTTG GTGGCTTAGA CGATTTCGAT
GATGAAGACC TCGTACTTGA AGAATCTTCC GAAGAAAAGA ACGAACCAGC AGAGGTAACG
GACCCAGATG ATATTGATGC GCTGCTTGAT TCACTAAGTG ATTCAGACAA TGAGCCAGCA
GAGGTAACGG ACCCAGATGA TATTGATGCG CTGCTTGATT CGGTAAGTGA ACCAGACAAT
GAGACTGCAG AGGTAACAGA CCCAGATGAT ATCGATGCGC TGCTTGATTC GGTAAGTGAA
TCAGTGAATG AGCCAGTTGA TGTAACAGAC CCAGATGATA TTGATGCATT ACTTGATTCT
ATAAATGATA CCGCAGAGGT AACAGATCCA GATGATATCG ATGCGCTGCT TGATTCGGTA
AGTGAATCAG TGAATGAGCC AGTTGATGTA ACAGACCCAG ATGATATTGA TGCATTACTT
GATTCTATAA ATGATACCGC AGAGGTAACA GATCCAGATG ATATCGATGC GCTGCTTGAT
TCGGTAAGTG AATCAGTGGA TGAGTCAGTC GATGTAACAG ACCCAGATGA TATCGATGCA
TTACTTGATT CTATAAATGA TACCGCAGAG GTAACAGATC CAGATGATAT TGATGCGCTG
CTTGATTTAG TAAGTGAATC AGTGAATGAG CCAGTTGATG TAACAGACCC AGATGATATC
GATGCATTAC TTGATTCTAT AAATGATACC GCAGAGGTAA CAGATCCAGA TGATATTGAT
GCGCTGCTTG ATTCGGTAAA TGAATCAGTG AATGAGCCAG TTGATGTAAC AGACCCTGAT
GTTATCGATG CATTACTTGA TTCTATCAAT GATACCGCAG AGGTAACAGA TCCAGATGAT
ATTGATGCGC TGCTTGATTC GGTAAATGAA TCAGTGAATG AGCCAGTTGA TGTAACAGAC
CCTGATGATA TCGATGCATT ACTTGATTCT ATCAATGATA CCGCAGAGGT AACTGACCCA
GATGATATTG ATGCACTACT TGAATCAATG TCGGGTAATG CTCCAACACC TCAACACGTT
GTAAAACAAG ATTCATCAGA AGCAATGAAT CCGTTGGAAC TTGATGTGGG AATGGATGAA
GAAAGTACTA TTGATAAGGT AACTGATAGT ACATTAAGTC CAGAAGACCA TAAAATTCAA
AATGAAAAAG CAGAGAATGA AGCTAAAATA TCCGCATTTA CCGCTGAATA TGTAACACCA
TTTCTTACCG CTGACTTTAC CGATATTATT GCTAAAGAAA GTGACGCTGA GTTAGCTTCA
GAAACACTAA TAAGTAATGA AAGTCATGAG TTGGATGATG AACTAGATAT TGATGCACTT
ATTGCTGATA CCATCAGTAA AGATGAAGCA ACGAGAGACT TTCAAGAAGA TAAAAGAGAC
GACGTTGGTG ATGAGTTAAC TGATTCATCA ATTGATGAAA CGTTCAATAC TCAAATCGAT
GGTGGTTTTA CTGAGGCTGA ATTAAGTCAA TTATTAGCAG ATGATTCAAT GGAAGATGAT
ACTGAGCAAG CGGAAGATAT TTCACCTGAG TCGATAGTTC TATCACCTGA CTTTACCGAT
GAAGATGTGC TAGCTGGTTT GTTATCTGAA ATGGCTGACG AAGAACCACT TGAAGAAGCT
GATGAATTAG ACGTTATAGA TGAGTTAGCT AATGTTGATT TTGATGAGCT ATTAGCCAAT
ATTGAAGAGG AATCAGCGAC TACGCCAACG AAACACGATG AGATTGAACT GATCTTTGAA
GGTGATGACA TAGGTGATGA TTTAATTGAT GATAGCCTTG GCGAAGAAAG TGTTCAAAAC
TCCCAGAAAA CAGAGCCAAC AGAAGATTAT GTCTCTGTCG ATGAGCTCAT CTCTGATAGT
TTAGATGAGG GTGATGCGTC AGAGCCTTAT GAGAAAACCA ATATTGACGT TGGTTTAGGT
AAATTTTCTC AAAATGATAG TGGTGTGGAT GTTGATGAAG ATGGCTCAAT GTCGAGTAAA
TTAGATTTAG CGAAAATGTA TATAGAAATG AATGATGAAG AAAATGCCCA AGTAATCTTG
CAAGAGGTAA TCTCCAAGGG AGATAAAACT CAGCGAGCAG AGGCACAAGC ATTATTAGAT
TCATTGTAA
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| Protein sequence | MQHLLRLCLW QAVIIGILTA HFPVNAEEER GIRMRGPKSS DVFPYDKYGP ITSKDTLWNI
ATRVRPDNRL SVYQVMQALY QENPQAFVDS NINYLVEGQY LKIPSFNNMM AINTNSAKKK
SESDSKAWKK AQPKTPKIPV FIEPSVKKKD LETVKTEIND QLQKIDGQQQ ERLEHIQNDI
SDSIDGLQAI LKENDDLRQQ LTSFNDKLGI MQDEVAKGKE IKLQMDDMIK LQQALLAKAE
AREKELLLER QQAALAEQDI MSSLWFKIAM GTLPAILILL LLALLFKRRK QASDEVFFNE
LDSKKQEPVA KKESTSEELS LDDELNLDDE LDLSLDGELN LDDELDLSLD DELNLDDELD
LSLDDELNLD DDLSIDLIES DDDVIHLDED DSLDDLEDIL LDDESDVDIL DGGELDQDDL
DSLLSGLDDE AENTESEELE GGELSQDDLN DLLGGLDDFD DEDLVLEESS EEKNEPAEVT
DPDDIDALLD SLSDSDNEPA EVTDPDDIDA LLDSVSEPDN ETAEVTDPDD IDALLDSVSE
SVNEPVDVTD PDDIDALLDS INDTAEVTDP DDIDALLDSV SESVNEPVDV TDPDDIDALL
DSINDTAEVT DPDDIDALLD SVSESVDESV DVTDPDDIDA LLDSINDTAE VTDPDDIDAL
LDLVSESVNE PVDVTDPDDI DALLDSINDT AEVTDPDDID ALLDSVNESV NEPVDVTDPD
VIDALLDSIN DTAEVTDPDD IDALLDSVNE SVNEPVDVTD PDDIDALLDS INDTAEVTDP
DDIDALLESM SGNAPTPQHV VKQDSSEAMN PLELDVGMDE ESTIDKVTDS TLSPEDHKIQ
NEKAENEAKI SAFTAEYVTP FLTADFTDII AKESDAELAS ETLISNESHE LDDELDIDAL
IADTISKDEA TRDFQEDKRD DVGDELTDSS IDETFNTQID GGFTEAELSQ LLADDSMEDD
TEQAEDISPE SIVLSPDFTD EDVLAGLLSE MADEEPLEEA DELDVIDELA NVDFDELLAN
IEEESATTPT KHDEIELIFE GDDIGDDLID DSLGEESVQN SQKTEPTEDY VSVDELISDS
LDEGDASEPY EKTNIDVGLG KFSQNDSGVD VDEDGSMSSK LDLAKMYIEM NDEENAQVIL
QEVISKGDKT QRAEAQALLD SL
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