Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3751 |
Symbol | |
ID | 3521297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3911282 |
End bp | 3912577 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637286198 |
Product | TPR domain-containing protein |
Protein accession | YP_270418 |
Protein GI | 71280828 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.591337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAATA AATTAGTGTT TAAAAATTTA AAACTTAAAA AATTATCAAC TTCTCTTGTT GTTGTTGCCT CACTACTTGT TGCGCAAGCA CCTTTTGCAA ATTATGCAGA AGCTGCTGGT GCCGAGAAGG TTGAGAAGAA GAAGAAACGT CCTACACAAT TAGTTGGCCC TCGTGTTGGT AAAAAAGTAC AAAAGGCTTT TGAAGCTTAT AGTGCTGATG ATATCAAGGG TGCTCTAGTT ATTTTGTTGG ATATTGAGGC TTCAAAACCA TACGACAAAG CTTATGTTTC GCGTATGGTT GCTGTTATGT ATGCAACGTT AGGTGACAAT GATCAAAAAA CTATTGAATA TCTTAAGAAA GCCTTAGAAC CAGATATTCT TAATGAAGTT GATCAAAGTG AATCTTTAAA GTTATTGGGT GATATGCAGA TGCAAACCAA AGACTATAAA GGCGCGCTTA AAAGTTTTTA TGCCTGGATG GATTTCTCTG GTAAAGACGA TGGTCCAACC TACGTCAAAA TTGCAAATGC GTACTACTCA TTAAAGCAAT TAGATAAGGT TATTGAGCCT GCGGATAAAG CGATTGCTGC TTTTGGTGAT AAACCAAATC AAAACCCATA CATCTTAAAA ATTACTTCTT ACTATGAACG TAAAATGTAT AAAGAAGCTG TAAAGGTTTT AGAAACAGTA ATACAAGTTT TTCCAGAAAA TAAGCAGTGG TGGACACAAT TACCAATGTT TTATTTGCTG ATTGAAGATT ATGATAAGGC AGTTCAAACG CTGGATTTAG CTTATAAACT TGGTCACTTG GATAAAGAAA GTCAAATTAA AACATTAGCG AGTTTATACT CTCAAACTGA AGCGCCTTAT AAGGCTGCCC AGTTGTTAGA AAAATACATC GCTTCTGGTT TAGTTAAACG TGATGATAAA AATATCTCTA CGTTGGCTAA TGCTTGGCAT TCTGCACAAC ATATCGATAA AGCGGCAAGT TATTATGGTG AATTAGCCAA AATGACTAGT GATGCAAAGC ATTATCGCAA ACAAGGTATG TTGTTAAAGC AAGATGAGCA ATTTTCTAAG GCAATTGTTG CTTTGAATAA AGCTATTGAA CTTGGTGTTT CTAACCAAGG TCGTATTCAT ATGAGTATTG CAGAATCATA TTTCTATTTA GAGAAGTATA AGAAGGCATA CGCAGCAATT CAAAAAGCAA TGAAAGATCC TAGTGCACGT AAGTCTGCAA AGGGTTGGAA AAGCTTTATT GTTGATACAG CAAGACGCAA AAACGTCACT ATTTAG
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Protein sequence | MFNKLVFKNL KLKKLSTSLV VVASLLVAQA PFANYAEAAG AEKVEKKKKR PTQLVGPRVG KKVQKAFEAY SADDIKGALV ILLDIEASKP YDKAYVSRMV AVMYATLGDN DQKTIEYLKK ALEPDILNEV DQSESLKLLG DMQMQTKDYK GALKSFYAWM DFSGKDDGPT YVKIANAYYS LKQLDKVIEP ADKAIAAFGD KPNQNPYILK ITSYYERKMY KEAVKVLETV IQVFPENKQW WTQLPMFYLL IEDYDKAVQT LDLAYKLGHL DKESQIKTLA SLYSQTEAPY KAAQLLEKYI ASGLVKRDDK NISTLANAWH SAQHIDKAAS YYGELAKMTS DAKHYRKQGM LLKQDEQFSK AIVALNKAIE LGVSNQGRIH MSIAESYFYL EKYKKAYAAI QKAMKDPSAR KSAKGWKSFI VDTARRKNVT I
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