| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3737 |
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| Symbol | |
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| ID | 3518995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3895482 |
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| End bp | 3898466 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286184 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_270404 |
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| Protein GI | 71278388 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCAGA AAACATTTAC TAAAACAAGA ATTGCAACGA GCTTGTCACT GATACTTGGA
GCAACTGCTT TACCTGCACT ATCAGCAGAA GAAGTAAGTT TAAAAGATAA AGAAAATGTT
GAAGTAATAG CTGTCACAGG TATCCGCAGT AGCTTAGTCA AAGCGATGGA TATCAAACGT
AGCGCACAAG GTGTTGTTGA TGCTATATCA TCAGAGGATA TGGGTAAATT TCCTGATTCT
AACTTAGCTG AATCATTACA GCGCATCTCT GGTGTATCGA TTGACAGATC TAACGGTGAA
GGCTCTAAAG TTACTGTTCG TGGTTTAGGT CCAGACTTCA ACTTAGTCAC TTTAAATGGC
CGTCAAATGC CTTCGTCTAA CCTTGAATCT ACCGTCATTA GTAACTCTCG TTCATTTGAT
TTTGCTAATC TTGCTTCTGA AGCTGTCAGC GGTGTAGAAG TTTATAAAAC TGCTAAAGCA
GAAGTGTCAA GTGGCGGTAT CGGTGCAACT ATCAACATTT TGACAGCAAG ACCACTTAAT
ACACCAGGAC AAAAAGCGTC TCTTGGGGTC AAAGCTGTGA TGGACCAGTC AACTGACGAA
GGTGATAGCG TCACCCCTGA AATTTCAGGT CTTTATAGTA ATACTTTTGC CGATGATACC
ATTGGTTTTG GTATTTCATT TAGTCACCAA GAAAGAAATG GTGCAACTAA AGAGGCTGTT
GTTCCGCAAT GGCATACTCA AGCCATTGCC CCCGTTGACG GCTGGAATGG CGGTATCAAT
AATACGGACT GGGAAGATGG TGATACATTC AACCGTCCAC AACAATTTCG TTACAACTTT
ACCGAATTTG ATCGCACCAG AGATAATGGA CAACTTGTTT TTCAATATGC TCCAAGTGAC
CGCATCACTA TTACTGCTGA TTATACTTTT TCAGAACAAA CGGTTGAGTC TACATCAAAC
GGCATTGGTG CTTGGTTTTG GGAAGGTGAA ACTATTGATG GCAGCTTAAA TGAATTTACA
ACAGGCACAA ACCACTCTCC TGTTGTTTGG CATTCAGGCG CAGGTCCTGA TTTATCATTC
TCTACGTCAT CAGATGCTTC AATAAATAAA AATGAATCAA TTGGTTTAAA TCTAGAATGG
CAAGCTACTG ATAACCTAAG ATTTGAACTT GATTATCACG ACTCTTCAGC AAAATCGAAA
GCAGATAGCC CTTACGGTAA TAGCTCAACT ATGGAGTATG CCGTTAACTC TCGTCAGAGT
ACCACGATTG ATTTTAGGCC TGACTTCCCT GTAATGTCTA TTTCACAATT GGACGGTTTA
ACAGGCAGTC CCGCTGAATT AATTACAACA GGTAGTTCTT TAAGAAACAG CCAATTTGAA
AATGATTTGT CTCAAATTCA GTTAAGAGGG CAATACGTTT TTGATGAGGG TGTTATCACG
AGTGTAGATT TTGGTATCTC AAAAACTGAG AATGATATTA GAGCTTCGAT TATGACTGCT
CAGCGAGATA CTTGGGGCGG TGAAGGCAGT GTAGATGATG TTACCGATAG TTTGTTTACG
CCGGGTAGCA GCTCCTCTCA ATTAGATAAC TTACCAAGTA CAGGGACTAA CGCAGCAGGA
GAAACAATTG ACCTTTTTGA CTTGTTTTAC AATTTTAGTT TTGTCGATGC ATCGAATGAA
GTAGCTTCTT ATGCTGCGCC AGCTAATAGT AATAACGAAG TTTCACCTGG TATTTGGCCA
TGCGCAGATC GTTTTTGTGT GAATGATCAA TGGACAACTG ATGAACTTAT ATCAGAAGAA
TATACTGCTA TTTATGCTCA AATAAATATG GAATTTGAAA TTGCAGATAT GCCCTTAGAT
ATATCTGCGG GTTTCCGTTA TGAAGAAACT GATGTTAAAG CAAGCGCAAT GGTACCTGCA
TACACAGGTG TGGATTGGGT TTCTAACAAT GAATTTGCAA CAGTTGATAC TGGAGAAAGC
GCCTTTACTA ACTTTGATGG CGATTATAAT AACTTTTTAC CTAACCTTGA TATCAGTTTA
GAGATTGATG ATGATTGGGT AGCAAGAGCC TCATTCGGTA AAACACTTTC AAGACCTACC
TACAATAATA TTCGAGGTGG TGTTGGTATT GGTGAAATCA GACAAGGTTT TGCGACAGCT
AGCAGTGGTG ATCCGGGCTT AATTCCTTTT GAGTCTGTCA ATGTTGATTT ATCATTAGAA
TGGTACTTTG ACGAAGGAAG TTATGCGTCT GTAGGTTATT TTAGAAAAGA TATAGAAAAC
TTCATTGGCA CAACGAAAAA TAAAAGTGAA TTATTCGGCC TTAGAAGTCC TACAAGTGGA
CCTCGCTTTG ATGAAGCTAT GGCTGCCGTA GGTAGTAGTG ACAATACTGC CATTAGACAA
TATATTTTTG ATAACTATCC AGAGTCAAGC ACCATAACCG GCGTAGACGC AAGCGGAACC
ACAACAGGGC AAATACACTC TGTTGCCGAA GATGAACTAA TTCAGTTTGA TGTCACGGTG
CCATTTAATG AGCGTGATGC TACTATCGAC GGTTTTGAAA TAGCTTTCCA ACATGCACTT
GAAAGTGGCT TTGGTATACA AGCCAACTTA ACTTTCGTAG ATAGTGATGC TGAATATGAC
CCAACCGTTT TTGACAGTCA ATTTGCCCTT CCTGGCTTAA GTGATACTGC CAACTTAGTC
GCATTTTACG ATAAAAATGG CATACAAGTT CGTATCGCTT ATAACTGGCG TGATGAATTC
TTAGTGAAAA CAGACAACAA CCTTAATAAC CCGCGCATCA ATGAGTCATA CTCACAAATT
GATATCAATG CGAGTTATAA CATCAATGAA GACTTAGTTG TGTTTTTTGA AGGAATTAAC
ATAACGGATG AAACTCAACG TATGTATAGC CGTAGCAGAA ACGAACTGTT AAATGCTATT
CAATCAGGTC CTCGTTACAA TATCGGCGCT CGCTATACTT TCTAA
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| Protein sequence | MIQKTFTKTR IATSLSLILG ATALPALSAE EVSLKDKENV EVIAVTGIRS SLVKAMDIKR
SAQGVVDAIS SEDMGKFPDS NLAESLQRIS GVSIDRSNGE GSKVTVRGLG PDFNLVTLNG
RQMPSSNLES TVISNSRSFD FANLASEAVS GVEVYKTAKA EVSSGGIGAT INILTARPLN
TPGQKASLGV KAVMDQSTDE GDSVTPEISG LYSNTFADDT IGFGISFSHQ ERNGATKEAV
VPQWHTQAIA PVDGWNGGIN NTDWEDGDTF NRPQQFRYNF TEFDRTRDNG QLVFQYAPSD
RITITADYTF SEQTVESTSN GIGAWFWEGE TIDGSLNEFT TGTNHSPVVW HSGAGPDLSF
STSSDASINK NESIGLNLEW QATDNLRFEL DYHDSSAKSK ADSPYGNSST MEYAVNSRQS
TTIDFRPDFP VMSISQLDGL TGSPAELITT GSSLRNSQFE NDLSQIQLRG QYVFDEGVIT
SVDFGISKTE NDIRASIMTA QRDTWGGEGS VDDVTDSLFT PGSSSSQLDN LPSTGTNAAG
ETIDLFDLFY NFSFVDASNE VASYAAPANS NNEVSPGIWP CADRFCVNDQ WTTDELISEE
YTAIYAQINM EFEIADMPLD ISAGFRYEET DVKASAMVPA YTGVDWVSNN EFATVDTGES
AFTNFDGDYN NFLPNLDISL EIDDDWVARA SFGKTLSRPT YNNIRGGVGI GEIRQGFATA
SSGDPGLIPF ESVNVDLSLE WYFDEGSYAS VGYFRKDIEN FIGTTKNKSE LFGLRSPTSG
PRFDEAMAAV GSSDNTAIRQ YIFDNYPESS TITGVDASGT TTGQIHSVAE DELIQFDVTV
PFNERDATID GFEIAFQHAL ESGFGIQANL TFVDSDAEYD PTVFDSQFAL PGLSDTANLV
AFYDKNGIQV RIAYNWRDEF LVKTDNNLNN PRINESYSQI DINASYNINE DLVVFFEGIN
ITDETQRMYS RSRNELLNAI QSGPRYNIGA RYTF
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