| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3713 |
|---|
| Symbol | |
|---|
| ID | 3518401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3864803 |
|---|
| End bp | 3865315 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637286160 |
|---|
| Product | putative phosphatase |
|---|
| Protein accession | YP_270380 |
|---|
| Protein GI | 71278808 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.207477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAC ATCCCTTCGA AACCTTAGCA CTGTCAAATG GGGCAAAGCT ATTATTTACA
CCTTGCCCCG GAACTAAAGC TGTTAACCTT GAGCAGTCAA TACTGCAACT CAAGCAACAG
GGCGTATCTA TGTTGCTTAC CCTAATGTTT GATAAAGAAA TGCTAGAAAA TAATGCCATT
AAGCTGCCAC TGCTTTGCCA TAAATATAAG ATCCAGTGGC TACAACTCCC CATTATTGAT
GATGAAGCCC CGCAAGAGGC GTTTCATCAA GAGTGGCAAA AGAAGAAAGA TCGAATCCTG
AATGAGATTA AGAATAAAGG GGTGGTAGCT GTACATTGCA AGGGGGGGAC AGGACGAACA
GGCACTGTTA TTTCTTTATT ACTATTACAA CTTGGCTGGT CAGCAGATAA AATTAAACAA
GAAGTACAAT TAATAAAACC CAAAGCATTA AGAATTCAAA AGCAAATTAA CTATTTAAAT
AGTCAGTTGA AAAACTCGGC AGATAAGTTT TGA
|
|---|
| Protein sequence | MNIHPFETLA LSNGAKLLFT PCPGTKAVNL EQSILQLKQQ GVSMLLTLMF DKEMLENNAI
KLPLLCHKYK IQWLQLPIID DEAPQEAFHQ EWQKKKDRIL NEIKNKGVVA VHCKGGTGRT
GTVISLLLLQ LGWSADKIKQ EVQLIKPKAL RIQKQINYLN SQLKNSADKF
|
|---|
| |