| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3592 |
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| Symbol | pcaJ |
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| ID | 3519250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3728924 |
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| End bp | 3729691 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637286040 |
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| Product | 3-oxoadipate CoA-transferase, beta subunit |
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| Protein accession | YP_270260 |
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| Protein GI | 71279243 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.894673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAAC TAACAGAACA ACAAAACCTT GAAACCACGA CACAAGTTGG CTGGAACCGA
GAACAAATGG CGCAACGCTG TGCACAAGAT ATTGAAGATG GCAGCTATGT AAACCTTGGC
ATAGGTATTC CAGAAAAAGT CGCTCAATAT GTTCCTGATG GCAGAGAAGT TATCTATCAC
ACAGAAAACG GTTTACTTGG CATGGGAAAT TCTCCCAGCG ATGAAGAGTT TGATGCTGAT
TTAATCAATG CCGGTAAAAA AGCAATAACA GCTATTCCTG GTGCTTCATA TTTTCATCAT
GGTGATAGCT TTGCCATGAT CCGCGGCAAT CATATAGATG TTTGTGTGCT AGGTGCTATG
CAAGTTTCAA TGAAAGGCGA TTTAGCCAAT TGGTCAACCG GCGCTGTTGA TGCAATTCCC
GCCGTGGGCG GTGCTATGGA CTTAGTGGCG GGTGTTAAAA CCATCTACAT TATTACCCAA
CACACTACCA AAAATGGGGC AGCTAAAATA TTACCTGAAT GTACTTTCCC GCTCACCGGA
CAACAAGTTG TTAATCGTAT TTATAGCGAT TTATGTGTCA TTGATGTCAC AGCAAACGGT
TTAGTACTTA TAGAGCTAGC GCCCGGTATT AGCTTTGATT ACGTACAAGA ACGTACAGGG
GTAGCGCTAC TTAATGGGCT GACTCAAAAA GATGAAGTTG CAAATAATAA AACCGTTAAT
AGCTCTAATA AGCCAGTCAG AAGTACACAG TATAAGGCGA AGCAGTAA
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| Protein sequence | MSQLTEQQNL ETTTQVGWNR EQMAQRCAQD IEDGSYVNLG IGIPEKVAQY VPDGREVIYH
TENGLLGMGN SPSDEEFDAD LINAGKKAIT AIPGASYFHH GDSFAMIRGN HIDVCVLGAM
QVSMKGDLAN WSTGAVDAIP AVGGAMDLVA GVKTIYIITQ HTTKNGAAKI LPECTFPLTG
QQVVNRIYSD LCVIDVTANG LVLIELAPGI SFDYVQERTG VALLNGLTQK DEVANNKTVN
SSNKPVRSTQ YKAKQ
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