| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3587 |
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| Symbol | |
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| ID | 3520520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3722980 |
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| End bp | 3724317 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286035 |
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| Product | sodium-dependent symporter family protein |
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| Protein accession | YP_270255 |
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| Protein GI | 71280057 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAG CTTCTTCTCG CGATTCTTTT CATTCTCGTC TTGGTTTTGT TCTCGCTGCA
GCAGGTGCTG CTATAGGTTT AGGCAATATT TGGGCGTTCC CTACTCAGGC GGCAAATAAT
GGCGGTGGTG CTTTTTTAGT TGTTTATTTA GTGGTGACTT TTTTACTTGC TTTGCCTGCA
CTTTATGCAG AAATTTATAT TGGCAATCAA GCACAAACTA ACCCTGTTTC CGCCTTAGCT
AACGCATGTG GTAAGCGCTT TAATAAACTC GGACACTCTG CTGGCATCAT AGGGATTATT
GGTGCGATGA TGATGCTCAG TTTTTATACC ATAGTAGCCG GTTGGATGTT GTCGCATGCG
CTAGCGTCAT TAGCTGAATT AGTTGGTTTA CTGGATTTAT CGCATTGGCT ATCGACCTCA
AGCACGCTGC GAAATGTAAT ATTTACGCCC ATATTTATCG TGCTAGGTGC TGCTATCGTT
CATCAAGGCG TTCACAGTGG CATAGAGCGT TGGTCTGCGC GATTAATGCC AATGTTATTA
GTGATGTTGT TTGGTTTAAT CATTTACATC TTACAGCAAG ATGGTGCGAA AGAAGGTTTG
ACGCTTTATT TAGTCCCTGA TTTTAGTCAA GTCACTGAGC CAAAATTGAT TATTTCGGCC
ATGGGGCAAG CATTTTTCTC ACTCGCTATT GGTGTTGGCG CTATGATGGC TTATGGCTCA
TATATGCCTA AAGGACAAAG TGTAGGTAAG TTAGTATTAT CGATAACGTT ACTTGATACC
TTTATTGCTT TTATTGCTGG TTTACTGATT ATCCCTGCTC TCTTTGTCGC TCAACATAGT
GGACAAGAAG TTTTTGTAGA CGGTCATCTC ATTGGTGAAG GGCAACTTAT TTTTAATATT
TTACCAACCT TATTTAGCTC TATGGGAGGC ATGGGATTAC TTGTTTCTTT TGCTTTTTTC
TCACTGTTAT CAATTGCAGC CCTTACCTCA ACAATTTCAT CAACTGAAGT GCCCGTTGCT
TATCTCATTG AAGATAAAGC GATGACAAGA AAACGTGCAA CTTGGTTAGT CTCTGGGTTA
GTATTTATTG CCAGTATGTT TCTCATTGCC TTTTTTGAGC AACTATTTGG CTTAGTGATC
CAGCTCTTAA CTACTATTTT ACAACCCCTA ATGTCATTGT TTTACTTCAT CGTTATTGGT
TGGTTGTGGA AACGAGGGAA TCAACTTACC GATATTGCTC AGTTAAATAA ACACATGTCA
CTAAAATTAC TTGGCTTTTA TTTACGCTTT ATCTGCCCAA TTCTTTTAGT GGTAGTCTTT
ATTAATGTGG CTTTTTAA
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| Protein sequence | MTTASSRDSF HSRLGFVLAA AGAAIGLGNI WAFPTQAANN GGGAFLVVYL VVTFLLALPA
LYAEIYIGNQ AQTNPVSALA NACGKRFNKL GHSAGIIGII GAMMMLSFYT IVAGWMLSHA
LASLAELVGL LDLSHWLSTS STLRNVIFTP IFIVLGAAIV HQGVHSGIER WSARLMPMLL
VMLFGLIIYI LQQDGAKEGL TLYLVPDFSQ VTEPKLIISA MGQAFFSLAI GVGAMMAYGS
YMPKGQSVGK LVLSITLLDT FIAFIAGLLI IPALFVAQHS GQEVFVDGHL IGEGQLIFNI
LPTLFSSMGG MGLLVSFAFF SLLSIAALTS TISSTEVPVA YLIEDKAMTR KRATWLVSGL
VFIASMFLIA FFEQLFGLVI QLLTTILQPL MSLFYFIVIG WLWKRGNQLT DIAQLNKHMS
LKLLGFYLRF ICPILLVVVF INVAF
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