| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3512 |
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| Symbol | nhaD |
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| ID | 3521109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3651172 |
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| End bp | 3652518 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637285960 |
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| Product | Na+/H+ antiporter NhaD |
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| Protein accession | YP_270186 |
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| Protein GI | 71280641 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00775] Na+/H+ antiporter, NhaD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTTTG CATCAGAGGC AGCACATCAG AGTATTGATT TAACTAGTCA TTGGATTGGC
TATACCGCTA TTGCTATTTT TGTTCTAGCT TATACGCTGG TGATTTTAGA AGAACAATTG
CATCTAAGAA AATCAAAACC CGTATTACTT GCTGCTGGAC TTATTTGGAT TTTAATCGCT
GCTTATTATG GTTCTAATGG CATGCCTCAT GCTGCCGAAG TTGCAATTCG TCATAATTTT
CTTGAATATG CTGAACTATT CTTCTTCTTA TTAGTTGCCA TGACTTACAT CAACGCACTT
TTAGAGCGTG ATGTTTTTAA TTCCCTTCGT GACTGGTTAG TACAAAAAGG TTATAGCTAT
AGAGCTTTAT TCTGGATAAC TGGTATTTTA GCTTTCTTTA TCTCTCCAAT TGCAGATAAC
TTAACAACGG CATTAATTAT GTGTGCTGTA GTATTAGCCG TAGGAAAAGA TGAGCCTAAA
TTTATCGCAA TGAGTTGTAT AAACATTGTG GTAGGCGCAA ACGCTGGTGG TGCATTTAGT
CCATTTGGCG ATATTACTAC TTTAATGGTA TGGCAAAAAG GTATGGTTCA GTTCTCTGAA
TTCTTCCACT TATTCTTACC ATCCGTTGTG AACTTTGTTA TTCCTGCACT TATTATGCAG
TTCTTTTTAC CTACAGGTAA CCCTAGTTCA GAGACAAGTG ACGTAACTCC TATCAAAAAA
GGTGGTTTAA TCATCGTTGG GTTATTTATT TTAACCATTC TTACTGCCGT ATCTTTCCAT
AACTTCCTAC ATTTACCACC GGTATTTGGC ATGATGTTAG GTTTAGGTTA CTTAAAGTTC
TTTGGTTATT ACCTTCGTAG ATCTGGTCAA GGTAAAATCA ACGATTCAGG TATACCGAGT
ACTCTTAAAC AAGAAGATGA ATTTGATATT TTCGATAAAA TAGCTAAATC AGAATGGGAT
ACTTTATTCT TCTTTTATGG TGTTATCCTT GCTGTAGGTG GTTTAGGCTT TATTGGTTAC
CTTGGTATGG CATCAGAGTT TATGTACGGT GAATTAGGCG CAACTAATGC CAACATTTTA
GTTGGTCTAT TATCTGCTAT TGTTGATAAC ATCCCCGTCA TGTTTGCAGT ACTAACAATG
AACCCTGATA TGAATCATAC GCAATGGTTA TTAGTAACAC TTACTGCTGG TGTTGGCGGT
AGTTTGTTAT CAGTAGGCTC TGCCGCTGGT GTTGCCTTAA TGGGACAAGC AAGAGGTCAC
TATACCTTCT TCAGTCACCT AAAATGGACG CCAGTAATTG CACTAGGTTA CGCTGCTAGT
ATTTATGTAC ATTTATTAAT AAATTAA
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| Protein sequence | MAFASEAAHQ SIDLTSHWIG YTAIAIFVLA YTLVILEEQL HLRKSKPVLL AAGLIWILIA
AYYGSNGMPH AAEVAIRHNF LEYAELFFFL LVAMTYINAL LERDVFNSLR DWLVQKGYSY
RALFWITGIL AFFISPIADN LTTALIMCAV VLAVGKDEPK FIAMSCINIV VGANAGGAFS
PFGDITTLMV WQKGMVQFSE FFHLFLPSVV NFVIPALIMQ FFLPTGNPSS ETSDVTPIKK
GGLIIVGLFI LTILTAVSFH NFLHLPPVFG MMLGLGYLKF FGYYLRRSGQ GKINDSGIPS
TLKQEDEFDI FDKIAKSEWD TLFFFYGVIL AVGGLGFIGY LGMASEFMYG ELGATNANIL
VGLLSAIVDN IPVMFAVLTM NPDMNHTQWL LVTLTAGVGG SLLSVGSAAG VALMGQARGH
YTFFSHLKWT PVIALGYAAS IYVHLLIN
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