Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3501 |
Symbol | |
ID | 3519820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3635709 |
End bp | 3636698 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637285949 |
Product | putative cyclase |
Protein accession | YP_270175 |
Protein GI | 71279365 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAA GTAATTTCAC ATCAGTTCTT ACACTTATTG CAGTAATGGG CACTTTAACC TTTACTTCTG TCTATGCAGA TCAAAGTAAA GTCGGTAAAA GTCCGTGGGG GCCAGATGAC GAAATTGGTC GTTTAAATTT AATGACCGAA GCGTCAAAAG CATCAATACT TTCTCGTATA AGTGGCGGTG ACGTTTATGA TCTCTCTGTT GAATACTTCA TGGGTATGCC TGGTTGGTTT CCTGCCGGCG ACCCGAGATA TACATTCTGG ATGACTCATA CACCACAAGG CACTGTTAAC AGTGATCCTA TGAATGTTGG CAAGGAAATG AATGAGCATG TCAGTTATTC TGGCTCTGCC ATTTCCATGT ACACACACAC GGGTACCCAT ATTGATGCTC TCAACCATTT CGGACTAGAT GGTAAAATAT ATAATGGCTT CGATGCAGAC AAAGATTTAG GTGACCGCGG CTGGAATAAA ACAGGCGCTG AAACTATACC GCCTATTGTT GCTCGTGGTG TTTTAATTGA TGTCGCCGCG GATCAAGGTG TTGAAGTATT ACCACCAAAC TTTCGTATTG GCAAAAAAGA AATACAAAGC GCACTTAAAA GTCAAAAAAT AACCCTTGAA CCAGGCGATG TTGTACTTAT TCGTACGGGG AAAATGGTCA ATTATAAGAA CACTGAAGCT TACCTTGAGG CACCTGCTGG ACTCGGCATG ACGGGTGCCA GATATTTGGT AGAACAAGGC GCTATGGTCA TCGGCGGAGA TAACCTTAGC CTAGAGGCAT TTCCTTCAGA GATAGAGGGA AATTATCTCC CAGTTCACAC TTATCTATTG GCGCAACACG GCATCCCTAT TATGGAGTTG GTTAACTTAG AAAAACTTTC ACAGGATAAA ACTTATCAGT TTGCATTCAT TGGGGGATCT CTAAAGTTAA GGGGCGCGGA TGCTGCTCCA ATGCGTCCTA TTGCAATTCC TATTAAGTAA
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Protein sequence | MTKSNFTSVL TLIAVMGTLT FTSVYADQSK VGKSPWGPDD EIGRLNLMTE ASKASILSRI SGGDVYDLSV EYFMGMPGWF PAGDPRYTFW MTHTPQGTVN SDPMNVGKEM NEHVSYSGSA ISMYTHTGTH IDALNHFGLD GKIYNGFDAD KDLGDRGWNK TGAETIPPIV ARGVLIDVAA DQGVEVLPPN FRIGKKEIQS ALKSQKITLE PGDVVLIRTG KMVNYKNTEA YLEAPAGLGM TGARYLVEQG AMVIGGDNLS LEAFPSEIEG NYLPVHTYLL AQHGIPIMEL VNLEKLSQDK TYQFAFIGGS LKLRGADAAP MRPIAIPIK
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